Manihot esculenta (cassava): 110611381
Help
Entry
110611381 CDS
T05761
Name
(RefSeq) F-box/LRR-repeat protein 4
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110611381
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
110611381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
LRR_At5g56370
F-box_5
F-box-like
F-box
LRR_At1g61320_AtMIF1
LRR_RPS2
LRR_13
Motif
Other DBs
NCBI-GeneID:
110611381
NCBI-ProteinID:
XP_021607367
LinkDB
All DBs
Position
3:30721119..30727507
Genome browser
AA seq
604 aa
AA seq
DB search
MRGQDWINNCLPDGLIFEIFRHLDSKSTRDACSLVCRRWLELERLSRTTLRIGATGNPDL
SVKLLARRFHNVKTIHIDERLSIPVPIQFGRRRGGDHSAPTLKLHSEKGLSEDLQLGSNV
LSDAGLSALGDCFPRLEKLSLIWCSTVSSLGLVSLAYKCSFLISLDLQGCYVGDQGLAAV
GKCCKRLEELNLRFCEGLTDTGLVELAQGCGKSLKSLGVAACAKITDLSLEAVSSYCKSL
ENLSLDSESIHNGGVLSVAQGCPSLKVLRLQCINVTDEALIAVGTHCLSLELLALNSFQR
FTDKGLRAIGDGCKRLKNLTLSDCYFLSDKGLEAIATGCRELSHLDVNGCHNIGTIGLEA
IGRSCPHLTELALQYCQRIGNHALLEIGKGCKFLQALHLVDCSSIGDDAICSIARGCRNL
KKLHIRRCYEIGNKGIMAIGENCKSLVDLSLRFCDRVGDEALIAIGQGCSLQHLNVSGCH
LIGDAGIIAIARGCPELSYIDVSVLQNLGDMAMAELGEGCPLLKEIVLSHCRQITDVGLT
HLVKNCRMLESCHVVYCPGITAAGVATVVSSCPNIKKVLVEKWKVSERTKRRAGTVISYL
CVDL
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggccaggattggattaacaattgtctccctgacgggctcatctttgagatcttc
aggcacctcgactccaaatccacccgcgatgcttgttctctcgtctgccgccgctggctg
gaactcgagcgccttagccgcaccactctccgtatcggcgctactggcaatcctgacctc
tctgtcaagctccttgcccgccgttttcacaatgtcaaaaccattcacattgatgagaga
ctctctattccagttccgattcaatttggaagaagaaggggtggtgatcattctgcacca
actcttaagctacactctgagaaaggtttatcagaagatttgcagcttggatcaaacgtt
ttgtctgatgctggtctaagtgctcttggcgattgctttccaaggctggaaaagttgagc
ttgatctggtgctccactgtttcaagtttgggtttagtgtctcttgcttacaaatgcagt
ttcttaatctctctggatttacagggttgctatgttggggatcagggtttggctgctgtt
gggaagtgttgtaagcggcttgaagagttgaacttgcgtttttgtgaaggtttgactgac
acgggcttggttgaattagctcagggctgtgggaaatcactaaagtctctaggtgttgct
gcttgtgcaaaaataacggacttatcattggaagcagtgagctcttattgcaaatcactt
gaaaatctgtctttggattcagaatccatccataatggtggtgttctttctgtggcccaa
ggatgcccttctttgaaagtcttgagactacaatgtattaatgttacagatgaggctttg
atagctgtgggaacccattgtttgtcattggagttattggctttaaacagtttccagcga
tttactgacaaaggcttgcgtgccattggtgatgggtgtaagagattgaaaaatcttact
ctaagtgattgctatttcctgagcgacaagggtttagaagcaattgccactggttgtagg
gaactgtcacatcttgacgtcaatggttgccacaatattggaacgattggactggaagcc
attggaagatcttgcccacacctcactgagttggctctgcaatactgccaaaggatcggt
aatcatgctcttcttgaaattggaaagggctgcaagtttttgcaggctcttcatcttgta
gactgctctagtattggtgatgatgccatttgcagtatagctagaggctgtaggaatttg
aagaaacttcatattcgccgatgttatgagatcggaaacaagggaatcatggccattggt
gagaattgcaagtctcttgttgatcttagccttcggttttgcgatagggtgggggatgag
gcccttattgccataggtcaaggttgctccttgcaacatctgaatgttagtggttgccac
ctaattggtgatgctggaataatagctattgcaagagggtgccctgaactcagttacata
gatgtgagcgtacttcagaatttgggggatatggcaatggccgaattaggagaaggatgc
ccattactgaaggagatagtgctgtcacactgccggcaaataactgatgtggggctaaca
cacctggttaaaaattgcagaatgctggagtcctgccatgtggtatattgtccaggtata
acggcagctggagttgccactgtggtatctagttgtccaaacataaagaaggtcctggtt
gagaagtggaaggtcagtgagaggaccaaaagaagagcaggcactgttatttcctaccta
tgcgtggatctttag
DBGET
integrated database retrieval system
