Manihot esculenta (cassava): 110611427
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Entry
110611427 CDS
T05761
Name
(RefSeq) elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110611427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110611427
03016 Transfer RNA biogenesis [BR:
mesc03016
]
110611427
03012 Translation factors [BR:
mesc03012
]
110611427
04131 Membrane trafficking [BR:
mesc04131
]
110611427
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mesc04147
]
110611427
Messenger RNA biogenesis [BR:
mesc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
110611427
Transfer RNA biogenesis [BR:
mesc03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
110611427
Translation factors [BR:
mesc03012
]
Eukaryotic type
Elongation factors
110611427
Membrane trafficking [BR:
mesc04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
110611427
Exosome [BR:
mesc04147
]
Exosomal proteins
Proteins found in most exosomes
110611427
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
SRPRB
AAA_22
FlpD
Semialdhyde_dhC
Motif
Other DBs
NCBI-GeneID:
110611427
NCBI-ProteinID:
XP_021607451
LinkDB
All DBs
Position
3:27438092..27440900
Genome browser
AA seq
449 aa
AA seq
DB search
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQIQEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGVLKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNV
KNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSQYPPLGRFAVRDMRQT
VAVGVIKSVDKKDPSGAKVTKSAAKKGGK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggagaaggttcacatcaacattgtggtcattggccatgtcgactctggaaag
tccaccaccactggccatcttatttacaagcttggaggtattgacaagcgtgtgattgag
aggttcgagaaggaagctgctgagatgaacaagaggtcattcaagtatgcctgggtgctt
gacaagctcaaggctgagcgtgaacgtggtatcaccattgatattgccttgtggaagttt
gagaccaccaagtactactgcactgtcattgatgcacctggccatcgtgactttattaag
aacatgattactggtacctcccaggctgactgcgctgttcttatcattgactcaaccact
ggtggttttgaagctggtatttccaaggatggtcaaacccgtgagcatgctctccttgct
ttcacccttggtgtcaaacaaatgatttgctgctgcaacaagatggatgctactacccct
aagtactccaaggccaggtacgacgaaattgtcaaggaggtctcctcatatctcaagaag
gttggctacaaccctgacaagattccttttgtgcccatctctgggttcgagggtgataac
atgattgagaggtccaccaaccttgactggtacaagggcccaactcttcttgaagctttg
gaccagattcaggagcccaagaggccctcagacaagcctctccgactcccacttcaggac
gtctacaagattggtggcattggaactgtcccagtgggtcgtgttgagactggcgtcctg
aagcctggtatggttgtgacttttggacccactggactgacaactgaagtcaagtctgta
gagatgcatcatgaggctctccaggaagccctccctggtgataatgttgggttcaatgtg
aagaacgttgctgtgaaggatctcaagagaggattcgtggcatcaaattctaaggatgat
cctgccaaggaggctgccaacttcacatcacaggtcatcatcatgaaccatcctggtcag
attggaaatggttatgctccagtgctagattgccacacctctcacattgctgtcaagttt
gctgagatcttgaccaagattgatcgccgatctggcaaggagcttgagaaggaaccaaag
tttttgaaaaatggtgatgctggtttcgtgaagatgattccaacaaagcccatggttgtg
gagactttctcccagtatcctccactggggcgttttgctgtgagggacatgcgccagact
gttgctgttggtgtgatcaagagtgtcgataagaaggacccaagtggagccaaggtcacc
aagtctgctgccaagaagggagggaagtga
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