Manihot esculenta (cassava): 110611439
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Entry
110611439 CDS
T05761
Name
(RefSeq) uncharacterized protein LOC110611439
KO
K19022
AP-5 complex subunit beta-1
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mesc03400
]
110611439
DNA repair and recombination proteins [BR:
mesc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
110611439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
Motif
Other DBs
NCBI-GeneID:
110611439
NCBI-ProteinID:
XP_021607478
LinkDB
All DBs
Position
3:complement(15661626..15666330)
Genome browser
AA seq
1119 aa
AA seq
DB search
MTDKPPALKTPLSPQDWDALIDDFQHGGARLHKWTAAPQFLSSLLDHALSSLLKKDFPLK
ISLLIFIEEFSETFFTEESYLLRFLDALRAVVQAPLDGIAVTFLLKEQFMISTTSIFISI
DALNKFQARCTEGLAELLLTVIHRPNHGVDRQTRAIACECLRELEKSYPCLLSGIAGHLW
SLCQSERTHACQSYLLLFSMVVYNIVNRKLNVSVLNTSVPLVPFNVPQFISNGKELVGLN
YKELRKALAFLLDTPQVLTPFGMVEFLQMIMPVAVSLELQGSMLKVQFFGLIYSFDPLLC
HLVLVMYSHFPDAFDGQELEIVRRLMLISRETQHYLVFRLLSLHWLLDLLSKMMLSREGR
KYKSIVDMGLRFYPAVFDPLALKALKLDLLAFYSICLDSLKLEVCSVEDRDAAKSVVKLV
EDGLVSVSAFKWLSPWSTETAVAFRAFHKFLIGASSHSDTDPSTTRALMNSVIFRTLKGM
LVKMTLDFLRLVPVVVSLIDRLLSCKKHCWLGERLLQMVDEYLLPKVKMDYTLVAFFPIF
DRIAENNTIPPSRLLDLLTKFMIFLVEKHGPNTGLKSWSQGSKVLGICRTMLMHHHSSRL
FLGLSRLLAFTCLYFPDLEVRDNARIYLRMLICVPGMKLKGILNFGEQLLGISPSTHSSS
FFNVISPRHQQNFKKSRSISSCIHLERMIPLLVKQSWSLSLPASSTGSSKPSHLESITDS
ESQVDLRGLDGSTSSLAKSEIERTNQLQEPLRVMDSKISQILVVLRRHFSCIPDFRHMQG
IKVNIFCLLRFESEPFNHLFGVGPPTSPSDGVDALPSLYATVLKFSSSAPYGSIPSYHIP
FLLGEPSRTNHISSPSVSLDIVAVENGSEEEENYRAPVTIDLEPREPRPGLVDVFIEANI
ENGQIIHGQLQSVSVGIEDMFLKAIVPSDLSEDAVPAYYSGLFDALWEACGPSASTGRET
FPLKGGKGAAAINGTRSVKLLEAPANSLIRAIEQYLASFVVSVIGEHLVDMVKDGGIIKD
IVWKDAAADSFVDSAASVTNLDRGPLHLTYFNDEEERETQVNDYKRKMGCIHALIFLPPR
FHLLFQMEVSDFSTLVRIRTDHWPCLAYVDDYLEALFLT
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaagccaccggcgctcaagacgccgctttcaccccaggattgggatgctcta
atcgacgacttccagcacggaggggctcgcctccacaaatggacggccgcccctcaattc
ctctcttctctcctcgatcacgctctctcctccctccttaaaaaggacttccctctcaaa
atctctctcctaatcttcatcgaagagttctccgaaacctttttcactgaagaatcctat
ttgctccgcttcctcgacgctcttcgcgccgtcgtccaagctcctctggacgggatcgcc
gtaacttttctcttgaaagagcagttcatgatctccacaacttcaatttttatctccatc
gatgcgctcaacaagttccaggcgcggtgcactgagggtttagctgagctgcttctcact
gttattcatcgtcccaaccatggggtggaccgccagacgcgagccattgcctgtgagtgc
ttgcgtgaattggagaagagttacccatgtttgctctctggtattgctggccatctatgg
agtttgtgtcaaagtgaacgaactcatgcctgccaatcttatcttttgttgttttctatg
gttgtttataatatcgttaatcggaaattgaatgtttctgttttgaatacttcggttcct
ttggttccttttaacgttcctcaattcatttccaatggtaaagagttggtgggcttgaat
tataaagagttgaggaaggctctggcgtttctgttggatacgcctcaggttttgactcca
tttgggatggtggagttcttgcaaatgattatgcctgtggctgtttctcttgagttgcag
ggctccatgttgaaggtacaattctttgggttaatttactcatttgatcctttgttgtgt
catcttgttttagttatgtattctcattttccggatgcatttgatggacaagagttagag
attgtcaggcgattgatgctcatttccagggaaacacaacattatttggttttccggttg
ctttcccttcattggttgttggatttattaagtaaaatgatgttgagtagagaagggaga
aaatataaatctattgttgacatgggtttgagattctatccagcagtgtttgatccactg
gctttgaaagcgttgaagcttgatttgcttgctttctactcgatatgtcttgatagtttg
aaactagaggtttgttctgttgaggatcgtgatgctgccaagtctgttgtcaagctggtt
gaagatggtcttgtttcagtttcagctttcaaatggttgtctccgtggagcactgaaact
gctgttgcattccgtgcctttcataaatttttgataggtgcttcatctcattctgacact
gatccttccacaactagagccctcatgaactctgtcatcttccgtacacttaagggtatg
ctggtgaagatgacattggattttctaaggttggtccctgttgttgtttctttaattgac
cgtttactaagctgcaaaaagcattgttggttgggagagcgcctgcttcagatggttgat
gagtatttgcttccaaaagtcaaaatggattatacattggttgccttcttcccaatattt
gatagaatagcagaaaacaatacaatacctccttcgagattgctagacctacttaccaag
tttatgattttccttgttgagaaacatggacccaatactggactgaaatcatggtcacag
ggaagtaaagtccttggcatttgtcgaactatgctgatgcaccatcatagctctagattg
ttccttggcttatctcgccttcttgcattcacttgtctatacttccctgatttggaggtt
cgagacaatgctaggatctatttgcgaatgctaatctgtgtaccaggaatgaagcttaaa
ggcatactgaattttggggagcaattacttggcatttcaccatctactcattccagttct
ttcttcaatgttatatctcctcgacatcagcagaatttcaagaaatctaggagcatctca
tcctgcattcatcttgagcgcatgataccattgcttgttaagcaatcctggtctttgtct
ttgccagcttcaagtactgggtctagcaaacctagtcatttagagagcattacagatagt
gaatctcaggttgatttaagggggctagatggtagtacgagttctctagcaaaatcagaa
attgaaagaactaatcaattgcaagagccattgcgtgtaatggattcaaagatttcgcag
atcttagtggtattaaggaggcacttctcatgtattcctgattttaggcatatgcaaggg
atcaaggttaacatattctgccttctgagatttgaatctgagcctttcaatcacttgttt
ggggttggcccccctactagtccatcagatggagtagatgcccttccttccctgtatgca
actgtgctcaaattttcatcctcagcaccatatgggtccattccatcttatcatataccc
tttcttctaggtgaaccctcgaggactaatcatatctctagcccatcagtatcactcgac
attgttgccgtggaaaatggctctgaagaagaggaaaattatagagctcctgtcacaatt
gatttggagccacgggaacctagacctggtctggttgatgttttcattgaagcaaatatt
gaaaatggccagataatccatggtcagcttcaaagtgtctcagtaggtatagaggacatg
tttctcaaggccattgtcccctctgacctctcagaagatgcagtacctgcatattattca
ggattatttgatgctctctgggaggcttgtggcccctctgccagcactgggcgggagact
ttcccgttgaaaggaggcaagggtgctgcagcaatcaacggaacccgatcagtcaagcta
cttgaagctcctgcaaattcattgattcgtgcaattgaacaatatttggcatcctttgtt
gttagtgtgattggagaacatctcgttgacatggtgaaggatgggggaatcatcaaagac
atcgtatggaaggatgctgcagcagattcttttgttgatagtgctgcctcagttactaat
ttagatcgaggtccacttcatctgacatattttaatgatgaagaagagagagaaactcag
gtaaatgactataaaagaaagatgggttgcattcatgcattgatatttcttccaccaaga
ttccatcttctttttcaaatggaagtctctgatttttcaaccttggttcgaattagaact
gatcactggccatgcttagcatatgttgatgattacttggaggctttgtttttgacatag
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