Manihot esculenta (cassava): 110611464
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Entry
110611464 CDS
T05761
Name
(RefSeq) long chain acyl-CoA synthetase 6, peroxisomal isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00061
Fatty acid biosynthesis
mesc00071
Fatty acid degradation
mesc01100
Metabolic pathways
mesc01212
Fatty acid metabolism
mesc04146
Peroxisome
Module
mesc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
110611464
00071 Fatty acid degradation
110611464
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
110611464
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mesc01004
]
110611464
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mesc04147
]
110611464
Enzymes [BR:
mesc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
110611464
Lipid biosynthesis proteins [BR:
mesc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
110611464
Exosome [BR:
mesc04147
]
Exosomal proteins
Exosomal proteins of breast milk
110611464
Exosomal proteins of breast cancer cells
110611464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
110611464
NCBI-ProteinID:
XP_021607522
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Position
3:complement(30290044..30301080)
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AA seq
698 aa
AA seq
DB search
MHPISMDSAERRMQAINAHLVAAGDSPSQLRFNPTAGEFFSEQGYSVVLPEKLQDGKWNV
YRSVRSPLKLMSRFPDHPDIGTLHDNFVHAVDAFRDYKYLGTRIRVDGTVGEYKWMTYGE
ASTARTAVGSGLMYLGIPNGSCVGIYFINRPEWLIVDHACSAYSYISVPLYDTLGPDAVK
YITNHADVRAIFCVPQTLNPLLSFLSEISTVRLIVVVGGMDDQMPSLPSSTGVQVITYSK
LLGQGRSNPQPFCPPKPEDVATICYTSGTTGTPKGAALTHGNLIASVAGASTANRFYPSD
IYISYLPLAHIYERANQVITAYYGSAVGFYQGDNMKLMDDMAALRPTIFCSVPRLYNRIY
ASITNAVKTSGALKERLFNAAYNAKKQAILNGKNPSPMWDRLVFNKIRERLGGRVRFMGS
GASPLSPDVMEFLKICFSCRVVEGYGMTETSCLISSIDEGDNLIGHVGSPNPACEIKLAD
VPEMNYTSDDQPYPRGEICVRGPIVFQGYHKDEAQTREVIDADGWLHTGDIGLWLPGGRL
KIIDRKKNIFKLAQGEYIAPEKIENVYAKCKFAAQCFVYGDSLNSSLVAIVSVDPDVLKA
WAASEDIKYENLEQLCNDPRARAAVLADMDAVGREAQLRGFEFAKAVTLVLEPFSMENGL
LTPTMKIKRPQAKAYFKNAISKMCAELATSDPSPKGKL
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgcatccaattagtatggactcagctgaacgacgcatgcaggccattaatgcacatctt
gttgccgccggcgactctccttctcagctccgtttcaaccccacagccggcgagttcttc
tctgagcagggttacagtgttgtgcttccagagaagttacaggatggaaaatggaatgta
tacaggtctgtccgttctcctttgaagctcatgagcagatttcctgatcatcctgatatt
ggtacattacatgataattttgtgcatgctgttgatgctttccgggattacaaatatcta
ggcacacgtatacgggttgatggaacagttggagagtataaatggatgacatatggtgaa
gcaagtactgcacggacagctgtgggttctggcctaatgtatcttggaataccaaatgga
tcttgtgttggaatatattttatcaacagaccagaatggctcattgttgatcatgcctgc
tctgcgtactcttatatatcagttcctttatatgacactcttggtccagatgctgtcaag
tatatcacaaatcatgctgatgtgcgcgctatattctgtgtgccccaaactttgaaccct
ttgctgagcttcttgtccgaaatttcaactgtacgtttgattgtggttgttggagggatg
gatgatcaaatgccatctcttccatcatcaactggagttcaagttataacgtattcaaaa
ctacttggtcagggccgcagtaatcctcagcccttctgcccaccaaaacctgaggatgtt
gctacaatttgctacacaagtggtacaacgggtacaccaaagggcgctgcattgacccat
ggaaacttgattgcaagtgttgctggggccagtactgctaatagattttacccatcagat
atttacatatcatacctgcctttagcacacatttacgaacgggcaaaccaggtcataaca
gcttattatggatctgctgttggattctatcagggagataatatgaaactaatggatgat
atggctgctctaagacccactatcttttgcagtgttcctcggctgtataatagaatatat
gctagtattactaatgctgtaaagacatctggggcattaaaggaaaggttattcaatgct
gcgtacaatgctaagaagcaagcaattctgaatggcaagaatccatctccaatgtgggac
agattggttttcaataagataagggaaagacttggtgggcgagttcgtttcatgggatca
ggtgcttcacccttgtctcctgatgtcatggagttcttgaagatctgctttagttgccgt
gtagttgaaggatatggaatgactgagacctcttgtcttataagttccattgatgagggt
gacaacctaattggccatgttggctctcctaatccagcctgcgaaataaagcttgcagat
gttccagaaatgaactacacatctgatgatcagccctatcctcgtggggaaatctgcgta
aggggtcccattgttttccaaggctatcataaagatgaagcacagacgagagaagtaatt
gatgcagatggatggcttcatactggagatataggactatggttacctgggggtcgtctg
aaaattattgatagaaagaagaacatttttaagctggcacaaggagagtacatagctcca
gagaaaattgagaatgtatatgctaaatgcaaatttgctgctcagtgctttgtgtatggg
gacagcctgaactcctctctggtagccattgtttcggtggatccagatgttttgaaagca
tgggctgcttctgaagacattaagtatgaaaatttggaacaactatgcaatgatccaaga
gcgagggctgctgttcttgcagacatggatgctgttggaagagaagctcagctccgaggt
tttgaatttgcaaaagctgtgactctagtgctggaaccattttcaatggaaaatggtctt
ctcactccaacaatgaagattaagagacctcaagcaaaggcatatttcaagaacgcaata
tcaaaaatgtgcgcagaacttgctacatctgatccttcgcctaaagggaagttgtga
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