Manihot esculenta (cassava): 110611724
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Entry
110611724 CDS
T05761
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110611724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110611724
Enzymes [BR:
mesc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110611724
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
110611724
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
DUF1272
FAIM1
Motif
Other DBs
NCBI-GeneID:
110611724
NCBI-ProteinID:
XP_021607821
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All DBs
Position
3:complement(19623437..19627609)
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AA seq
308 aa
AA seq
DB search
MAPGGIISKEMIESRVAFADYETATSNTEFRALPSRKTATSFGGNLGTSSTSDVQNLLEC
PVCMNLMCPPIYQCPNGHTLCSYCKARIHNACPTCRGELGNIRCLALEKVAESLELPCKY
QIVGCPDIFPYYSKLKHEKNCKYRPYNCPYAGAECSVTGDIPLLVMHLKNDHKVDMHDGC
TFNHRYVKSNPQEIDNATWMLTVFNCFGKQFCLHFEAFQLGMAPVFMAFLRFMGSEDEAR
QFSYSLEVGGNGRKLTWQGIPRSIRDSHRKVRDSQDGLIIQRNMALFFSGGDQQELKLKV
SGRIWKEQ
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggcccctggtggtatcatctccaaggagatgatcgagtcacgcgttgcatttgcagat
tatgaaacggcaacctccaatactgagttcagagctttgccttcgagaaaaacagcaaca
agtttcggtggaaatctcggaacatcatcaactagtgatgtgcagaacctgcttgaatgt
cctgtctgcatgaatttaatgtgccccccaatttaccagtgtcccaatggtcatactcta
tgttcatattgcaaggctagaatacacaacgcttgccccacttgccgaggagagcttgga
aatataaggtgcttggccctggaaaaagttgccgaatcacttgaactcccctgcaaatac
cagattgttggttgtcctgatatatttccatactatagcaagctaaagcatgaaaagaat
tgcaaatatcgtccgtacaactgcccgtatgccggagctgaatgttctgtcactggtgat
attccacttcttgttatgcatctgaagaatgatcacaaggttgacatgcatgatggatgt
accttcaatcacagatatgtcaaatccaatccccaagaaattgataatgctacatggatg
ttaactgttttcaattgttttggcaaacagttctgcttgcactttgaggcatttcaacta
ggaatggcacctgttttcatggcattcctgagattcatgggcagcgaagacgaagcaagg
caattcagttacagtttggaagttggtggaaatggcagaaagcttacatggcaagggata
cccagaagcatccgcgatagccataggaaagttagagatagccaagatggactaatcatt
cagagaaacatggcacttttcttttcaggtggcgatcaacaggagctgaagctgaaagtg
tctggacgcatctggaaagaacagtaa
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