Manihot esculenta (cassava): 110611756
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Entry
110611756 CDS
T05761
Name
(RefSeq) RAN GTPase-activating protein 1
KO
K14319
Ran GTPase-activating protein 1
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110611756
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110611756
Messenger RNA biogenesis [BR:
mesc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
110611756
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Gene cluster
GFIT
Motif
Pfam:
WPP
LRR_6
LRR_1
LRR_4
LRR_8
Motif
Other DBs
NCBI-GeneID:
110611756
NCBI-ProteinID:
XP_021607901
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Position
1:37966485..37970204
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AA seq
540 aa
AA seq
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MDSTMQAFQHRTLSVKLWPPSQSTRLMLVERMTKNLITPSIISRKYGLLSKEEAEEDAKE
IEESAFAVADQHHQKEPDGDGSSAVQVYAKESSKLMLEVLKRGPRRKEDGEAAAIEKSAA
VHGDVFDISGGQRAFISAEEAEGLFKPLKEPGNQYSKICFSNRSFGLDAAGVAEPILSSI
KDQLTEVDLSDFVAGRPESEALQVMNIFSLALEGSNLRYLNLSNNALGEKGVRAFEALLK
SQNSLEELYLINDGISEEAACAVRELIPSTGKLKVLEFHNNMTGDEGAVAIADIVKRSPM
LENFRCSSTRIGSDGGVVLAEALGACSRLRKLDLNDNMFGVEAGVALSKSIVAFADLTEI
YLNYLNLEDEGAEALSNALKESAPSLEVLEMAGNDITAKGASALAACIAAKQFLSKLNLS
ENELKDEGGILIAKAIESGHGQLNEVDLSTNSIRRAGARLLGQAVVLKPGFKLLNINGNF
ISDEGIDEVKDIFKNLPGVLGPLDENDPEGEDLDEAKEVDADNEDELESKLKGLEIKHDE
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggattctacaatgcaagctttccagcaccgaacactttctgttaaattgtggcctcct
agtcagagtactaggttaatgcttgtagagagaatgacgaagaatcttattactccatct
attatttccagaaagtatggactattgagcaaagaagaggctgaggaggatgccaaggaa
attgaagagtcagcatttgctgttgcagaccaacaccatcagaaagagccagatggtgat
ggaagttctgcagtgcaggtttatgccaaagaatccagtaagctcatgctggaagttctt
aaaaggggccctagaaggaaggaggatggggaggcagcagcaattgagaaatctgctgct
gtgcatggagatgtatttgacatatctggtggtcaacgcgcgtttatcagtgcagaggag
gctgagggtctttttaaaccacttaaggagcctggaaaccagtattctaagatctgtttc
agcaacagaagttttggcttggatgctgctggtgttgcagagccaatcttgtcttcgatc
aaggatcagttgacagaagtagacttatccgactttgttgcaggaaggccagagtcagaa
gctcttcaagttatgaatatattttctttggccctggagggttctaacttgagatatctg
aacctttcaaataatgccttgggtgaaaaaggtgtaagggcttttgaagcactcctcaaa
tcacaaaatagtctggaggagctttatctaataaatgatggtatctcagaggaagctgct
tgtgcagttcgtgagctaatcccttccactgggaagctgaaggtccttgagtttcacaac
aacatgacaggtgatgaaggtgcagttgctattgctgatattgtgaaacgatctcctatg
ttggagaatttccgatgttcttcaacaaggataggctcagacggtggtgttgtactggct
gaagcacttggagcatgtagtcgtttacggaagcttgatcttaatgataacatgtttgga
gtggaagctggagttgctttgagcaagtctatagttgcatttgcagatcttactgagatt
tatctcaattacctaaacttggaggatgagggggcggaagcactttccaatgctctaaaa
gagtctgcaccttcacttgaagttcttgaaatggctggtaatgatataactgccaaagga
gcttctgctttggcagcctgtattgcagcaaaacaatttctcagcaagttaaacctttct
gagaatgaactgaaggatgaaggtggtattttgattgctaaggcaatagagagtggtcat
ggccagttaaatgaagttgatttgagcactaactcaatcagaagggccggggcaaggctc
ttgggacaggctgttgtgcttaagcctggatttaagctgctcaatatcaatggtaatttt
atatctgatgaagggatagatgaggtgaaggatatattcaagaatttgcctggtgtgctt
gggcctttggatgagaatgatccagaaggtgaagatcttgatgaggcaaaagaagtggat
gcagataatgaagatgaactggagtctaaactcaaggggcttgaaatcaagcatgacgaa
taa
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