Manihot esculenta (cassava): 110611762
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Entry
110611762 CDS
T05761
Name
(RefSeq) chaperonin 60 subunit beta 2, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110611762
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110611762
03110 Chaperones and folding catalysts [BR:
mesc03110
]
110611762
03029 Mitochondrial biogenesis [BR:
mesc03029
]
110611762
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mesc04147
]
110611762
Enzymes [BR:
mesc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
110611762
Messenger RNA biogenesis [BR:
mesc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
110611762
Chaperones and folding catalysts [BR:
mesc03110
]
Heat shock proteins
HSP60 / Chaperonin
110611762
Mitochondrial biogenesis [BR:
mesc03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
110611762
Exosome [BR:
mesc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110611762
Exosomal proteins of other body fluids (saliva and urine)
110611762
Exosomal proteins of breast cancer cells
110611762
Exosomal proteins of colorectal cancer cells
110611762
Exosomal proteins of bladder cancer cells
110611762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
KH_PARP14_2
Motif
Other DBs
NCBI-GeneID:
110611762
NCBI-ProteinID:
XP_021607912
LinkDB
All DBs
Position
3:17238162..17243056
Genome browser
AA seq
608 aa
AA seq
DB search
MAFTFAAMSSVGSLAAANGCVMDKKLASSSNRLSSFASISGSSFSRRQNVVLHRSRSPKI
CAMAKELHFNKDGTTIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVA
KEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT
RGIEKTSKALVNELKSMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLE
EGKSAENSLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINILE
DAIRSGYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGG
TVIRDEVGLALDKVGKEVLGHASKVVLTKDTTTIVGDGSTQEAVNKRVAQIRNLIEAAEQ
DYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT
LLRLASKVDAIRDGLDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSNDNPK
FGYNAATGNYEDLIAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPVPAGNP
MDNSGYGY
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggccttcacctttgctgccatgtcatcagttggatccttggctgcagctaacggctgt
gtgatggataagaaacttgcgtcttcttcaaataggttgtcatcttttgcctccatttct
gggagctcatttagtaggagacagaatgtagtcttacatagatcacggtctcctaagatc
tgtgccatggccaaggagttgcattttaacaaggatggaacaacaattaagaaattgcaa
actggtgtgaacaaactagcggatctagttggggttacacttggacctaagggccggaat
gttgtacttgagagcaagtatggctccccaaaaattgttaatgacggtgttactgttgct
aaagaggttgaattggaggatccagttgagaatattggtgccaagttggtgagacaggca
gcagccaagacaaatgacctggctggtgatggtactacaacatctgttgttcttgctcaa
ggtcttattgctgaaggtgtcaaggttgtagctgctggtgcaaaccctgttctgattact
aggggtattgagaagacctcaaaggctttagtgaatgaactcaagtcaatgtcaaaggag
gtcgaagacagtgagcttgctgatgtagcagctgtcagtgctgggaacaactatgaagta
gggaatatgattgctgaagccatgagtaaagtgggacgtaagggtgtggtgactcttgaa
gagggcaaaagtgcagagaacagcctgtatgtcgttgagggaatgcaatttgaccgtggt
tatatatcaccttattttgtcactgacagtgaaaaaatggcagttgaatatgagaactgc
aagttgctgcttgttgataagaaaataacaaatgcaagggatcttattaacattctggaa
gatgcaatcaggagtggatacccaattctgattattgctgaagacattgagcaggaagct
ctggcaactcttgttgtgaataaacttaggggtgctttgaagattgctgctctcaaagct
cctggttttggagagcggaagagtcaataccttgatgacattgctattttaaccggagga
actgtcataagagatgaggtgggtcttgccttggacaaagttggtaaggaggtcctgggt
catgcttccaaagtggtacttaccaaggatactactacaattgtgggtgatggaagcacc
caagaagcagtaaacaagagagttgcgcaaataagaaatctcattgaggctgctgagcaa
gattatgagagggaaaaactcaatgagagaattgcaaaattgtcagggggggttgctgtg
atacaggttggagcacaaactgagacggagcttaaagaaaagaaattgagagttgaagat
gctcttaatgcaacaaaggcagctgtggaggaaggtattgtggttggtggtggatgcacc
ctgttgagacttgcatcaaaggtagatgccattagagatggccttgacaatgatgaagaa
aaggttggagcagatattgtgaagagggcattgagctacccactcaagttaattgccaag
aatgctggtgttaatggaagtgtggtcagtgagaaggttctttccaatgacaatccaaaa
tttggatataatgctgcaactgggaactatgaagatctaattgctgctggaattattgat
ccaaccaaggtggttagatgttgcttagagcatgcatcatccgtagcaaagacattcttg
atgtcggattgtgtagttgtggagatcaaggagcctgaaccggttcctgctggcaatccc
atggacaattcaggatatgggtactaa
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