Manihot esculenta (cassava): 110611775
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Entry
110611775 CDS
T05761
Name
(RefSeq) two-component response regulator ARR12 isoform X1
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
110611775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mesc03000
]
110611775
Transcription factors [BR:
mesc03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
110611775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
DNA_pol_phi
Motif
Other DBs
NCBI-GeneID:
110611775
NCBI-ProteinID:
XP_021607936
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All DBs
Position
3:complement(910889..915255)
Genome browser
AA seq
685 aa
AA seq
DB search
MTVEQGIGEPRDQFPIGMRVLAVDDDPTCLLLLETLLRRCQYNVTTTSQAIAALKMLREN
KNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSAYSDPKLVMKGITHGACDYLLKP
VRMEELKNIWQHVIRRRKFDNKDWNNFDNQDKLHHGSDETTADHKLNKKRKDQNEDEDED
RDDNGHENEDPTTQKKPRVVWSVELHRKFVAAVNQLGLDKAVPKKILDLMNVEKLTRENV
ASHLQKYRLYLKRISAVANQQATMAALGSPDASYLQMGPVNGLGFPNLAGTGQFHNATFR
SFPPSGMLGRLNSPAALGMRGLPSAGVIQIGHLPTTGQLTSSQSQFQSIIHPRNGGNVLQ
GMPMSLEFDQVHSNKVVTYIRDTDVNDTTTPSVSSGFLDAKIMAGSSNGPLLGVSNKSLM
LEGNALEAQDGQKFGKQSSLAVASLSLDSGFSSNFLDNGSCNDSWSSSVHSTGIQSNSFA
LNECFQQATMHPSNIRDCVSTMASQSGNNASHVSSISSMPIHLQDSKADVHCQIASITSN
ARQMINNAPQRWDDRRQDASCRSNAVCCSINSGVPIHGTGNPMGQSLDPNDVILDRTKNF
NSTRQPNIVDPSPMKHDEVENLTMESLMRSNEGYAVGQQNQQGSHVSNNFGSLEDLACVM
VKQENKVTATVGEFAYGAYSLRMSM
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgactgtagagcaaggaattggagaacccagagaccagtttcccattggcatgagggtc
ttagccgttgacgatgaccctacttgcctcttgctgctagagactctgcttcgtcgttgc
caatacaatgttaccacaacaagtcaggcaattgctgcattgaagatgttaagggaaaat
aagaacaagtttgacctggttatcagtgatgtgcatatgccagacatggatggttttaaa
ttgctggagctcgtggggcttgagatggacctacctgtcataatgttgtcagcatatagt
gatccaaagcttgtgatgaaggggattactcatggagcttgcgattatttgctgaagcct
gttcgaatggaggagttgaagaacatatggcaacatgtaattaggagaagaaaatttgat
aacaaggattggaataactttgacaaccaagacaagcttcatcatggaagtgatgaaacc
acagctgaccacaagcttaataaaaaaaggaaggaccagaatgaagatgaggatgaggac
cgtgatgataatggacatgaaaatgaggatccaacaacccaaaagaaacctcgggttgtt
tggtctgtagagctgcatcgcaagtttgtcgcagctgttaatcagttaggccttgacaaa
gctgtgcctaaaaagattcttgatttaatgaatgttgaaaagcttacaagagaaaatgtc
gcaagccatctccagaaatataggctttaccttaaaaggatcagcgctgtggcaaatcag
caagctactatggcagctttaggcagcccagacgcttcctatttgcaaatgggtcctgtg
aatggacttggtttccccaacttggctggaactgggcagtttcataatgcaactttcaga
tctttcccacctagtggtatgcttggcaggttaaattctcctgctgctcttggtatgcgt
ggtcttccttctgctggagtgattcagataggtcatttaccaaccacaggccaattgact
agcagtcagagccaattccagtcaattattcatccgagaaacggtgggaatgtgcttcaa
gggatgccaatgtcattagaatttgatcaagtacattctaacaaggttgttacctacatt
agagatactgatgttaatgatacaactactccctctgtttctagtggcttcctagatgca
aaaataatggctggcagctcaaacggtcctcttctcggtgtttcaaacaaatccttgatg
ttagaagggaatgctctagaggcacaagatggccaaaagtttggaaaacaatcttccctt
gctgtggcttctttatctttagattcagggttttcttccaattttctggataatggcagc
tgtaacgacagctggtcaagttctgttcattcgacaggcatccaatcaaattcttttgcc
ttaaatgaatgctttcagcaagctactatgcatcctagtaacatcagagattgcgtgtca
acaatggcttcacaaagtgggaataatgcttctcatgtctcttctatttcttcaatgcca
attcacttgcaggactccaaggcagatgtacattgccaaatagcttcaattacgagtaat
gctagacaaatgattaacaatgccccacaaaggtgggatgaccggaggcaagatgcttct
tgccgctcaaatgcagtttgttgttcaataaactctggagttcctattcatggtactggg
aatccaatgggtcagagtttggacccaaatgatgtaattttggatagaaccaagaacttc
aattcaacaagacaaccaaatattgttgatccatctcccatgaaacatgatgaggttgaa
aatttgactatggagtcactaatgaggtccaacgaaggatatgcggtaggccaacagaac
caacagggcagtcatgtttccaataatttcggctccttggaagatttagcatgtgtaatg
gtgaaacaggaaaataaggtgacagcaacagtaggagaatttgcttacggtgcttattct
ctgaggatgagcatgtaa
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