Manihot esculenta (cassava): 110611802
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Entry
110611802 CDS
T05761
Name
(RefSeq) probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic isoform X1
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00730
Thiamine metabolism
mesc00900
Terpenoid backbone biosynthesis
mesc01100
Metabolic pathways
mesc01110
Biosynthesis of secondary metabolites
Module
mesc_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
110611802
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
110611802
Enzymes [BR:
mesc01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
110611802
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Gene cluster
GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
Transketolase_C_1
E1_dh
Motif
Other DBs
NCBI-GeneID:
110611802
NCBI-ProteinID:
XP_021607979
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All DBs
Position
3:complement(1516420..1523678)
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AA seq
714 aa
AA seq
DB search
MGTAAPQYPYGITAHFDGNFGYKLDTSSSKFPCKVGFLRLNLYQSSASITNSKGFVSRIC
SVPDLDDIFWEKVSTPILDVVENPIHLKNLTPKELKQLADEIRAELSSIMSRTHKSIKAS
LAVVELTVAVHHVFNAPVDKILWDFGEQTYAHKILTGRRSLMHTLRLKNGLSGFTSRSES
EYDPFGAAHGCNSISAGLGMAVARDVKGKRERVVTVISNGTTMAGQVYEAMSNAGYLDSN
VIVILNDRRHSLHPKIEEGPKTSINALSSTLSKLQSNKSFRKFREVAKGVTKRIGMGMHE
LAAKVDEYARGMIGPLGSTLFEELGLYYIGPVDGHSIEDLVCVLQEVASLDSMGPVLIHV
ITEENREPEDKQKSKELQEGSFLFDSSLYSSHTRTYSDCFAEALVMEAEKDKDIVTVHAG
MEMEKAFQLVLERFPDRFFDVGMAEQHAVTFSAGLSCGGLKPFCIIPSAFLQRAYDQVIH
DVDVQKIPVRFVITSAGLVGSDGPTQGGPFDITFMSCLPNMIVMAPSDEDELVDMVATAV
HIDDRPVCFRYPRGAIIGTDHFVRSGIPIEVGKGKVLIEGKDVALLGYGAMVQNCLKARH
LLSKLGIEVTVADARFCKPLDIKLLRQLCENHPFLVTVEEGSVGGFGSHVAQFMALDGKL
DGRVKWRPIVLPDSYIEHALPKEQLNLAGLTGHHIAATVLKLLGRTREALLLMS
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgggtactgctgctcctcagtacccatatggaatcactgcacatttcgatggaaatttt
ggttacaagttggatacttcaagctccaagtttccttgtaaagtgggatttttaagactt
aacttgtaccaaagttctgcttccatcactaattccaagggatttgtcagccgaatatgt
tcagtacctgatcttgatgatatcttttgggagaaagttagtacacccatacttgatgtg
gttgaaaaccccatccacttgaaaaatttgacccctaaggaactgaaacaactggctgat
gaaatacgagcagaattgtcttctataatgtcaaggactcacaaatctattaaggccagt
ttagcagtggtggaacttactgttgccgttcatcatgttttcaacgcaccagtggacaag
atactatgggattttggagaacagacatatgcacacaaaattctcacaggaaggcgatcc
cttatgcatactctgagactaaagaatggactttctggctttacatctcggtctgagagc
gaatatgatccatttggggcagcgcatggatgcaatagtatttctgctgggctggggatg
gcagttgcacgtgatgtgaaaggtaaacgggaacgtgttgttacagtcatcagcaatggg
acaactatggctggtcaggtctatgaagcaatgagcaatgcaggttatttggactcaaat
gtgatagttattttaaatgacagacgtcactctttgcacccaaagattgaagagggccct
aagacttcgataaatgctctatctagcaccctaagcaagctgcagtcaaataaatcattc
cggaaatttagagaagttgcaaagggtgttaccaaaaggattggtatgggtatgcatgaa
ttagcagccaaagttgatgagtatgcacgtggtatgataggtcccctaggatcaactctc
tttgaagagctcggtttgtattacataggccctgttgatggacacagcattgaagaccta
gtttgtgttctacaagaagtggcatctctggattctatgggacctgtcttgatacatgta
ataacagaagagaatagagaacctgaagataagcaaaagagtaaggaattgcaggaaggc
tcatttttattcgattcttctctctatagtagtcatactcgaacatatagtgattgcttt
gcggaggctttggttatggaggcagagaaggacaaagatattgtgactgttcatgcagga
atggaaatggaaaaagcttttcaactggttctggaaagatttccagacaggttttttgat
gtgggaatggctgagcagcatgcagttacattttctgccggtttatcatgtgggggcttg
aagccattttgcataattccttctgcttttctacagagagcatatgaccaggtgatccat
gatgtagatgtgcagaagattccagttcgttttgtcattacaagtgcaggattggtaggg
tcagacggtcccacgcagggtgggccatttgatataacattcatgtcatgcttaccaaac
atgattgttatggcaccatctgatgaagatgagcttgtggacatggtggccactgcagtt
cacattgatgatcgtccggtctgcttccgttatccaagaggtgccattattgggacagat
cattttgtgcgcagtggaattccaattgaggttggaaagggaaaagttcttatagagggt
aaagatgttgctttgctagggtatggagcaatggttcagaactgcctcaaagctcggcac
cttctttcaaagcttggcattgaggtaactgttgctgatgcaaggttctgcaaacctctc
gacataaagcttctcagacaactatgcgaaaaccatccatttctggtcacagttgaggaa
ggctctgtagggggatttggatcccatgttgcacagttcatggctctcgatggaaagctt
gatggtagagttaaatggcgacctatcgttttaccggacagctatattgagcatgcattg
ccgaaggagcagcttaaccttgctggactgactggacatcacattgctgcaacagtgcta
aaattgcttggccgcacccgcgaagctctccttttaatgagctag
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