Manihot esculenta (cassava): 110611931
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Entry
110611931 CDS
T05761
Name
(RefSeq) serine/arginine-rich splicing factor RSZ22A
KO
K12896
serine/arginine-rich splicing factor 7
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110611931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mesc03041
]
110611931
Spliceosome [BR:
mesc03041
]
Common components
Common spliceosomal components
SR proteins
110611931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
RRM_7
Motif
Other DBs
NCBI-GeneID:
110611931
NCBI-ProteinID:
XP_043811274
LinkDB
All DBs
Position
3:434553..437748
Genome browser
AA seq
192 aa
AA seq
DB search
MSRVYVGNLDPRVTERDLEDEFRRFGVIRSVWVARRPPGYAFIDFDDKRDAEDAIHELDG
KNGWRVELSHNSRGGGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRVGGGGGGGG
GGGGGRRRSRSPRYRRSPSYGRRSYSPRGRSPKRRSLSPRGRSYSKSPPYRGREELPYAN
GNGTRDHRRSRS
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtgtgtatgtgggtaatttggaccctcgagttactgagcgtgatcttgaagat
gaatttcgcagatttggagtcataagaagtgtatgggttgcacggaggccaccaggctat
gcatttattgactttgatgataaaagggatgcggaggacgcaattcatgaattagatggt
aaaaatggttggagagttgagctttctcacaactctagaggtggtggtggtggtggtggc
cgtggaggaggtcgtggccgttctggcggttctgacttgaagtgttatgagtgtggtgaa
cccggtcattttgctcgtgaatgtcgtttgcgtgttggtggtggtggtggtggtggtggc
ggcggcggcggtggaagacgacgtagtcgtagccctaggtatcgtaggagcccaagctat
ggtcgaaggagctacagccctcgtggacgatcccccaaacgccgcagcctttcacctcgt
ggccgcagctatagcaagtctccaccgtaccgtggtcgtgaggagcttccctatgccaat
ggaaacggtacaagggatcatcgccgaagcaggagctga
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