Manihot esculenta (cassava): 110611968
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Entry
110611968 CDS
T05761
Name
(RefSeq) LOW QUALITY PROTEIN: polyprotein of EF-Ts, chloroplastic
KO
K02357
elongation factor Ts
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
mesc03012
]
110611968
03029 Mitochondrial biogenesis [BR:
mesc03029
]
110611968
Translation factors [BR:
mesc03012
]
Eukaryotic type
Elongation factors
110611968
Prokaryotic type
110611968
Mitochondrial biogenesis [BR:
mesc03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
110611968
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EF_TS
S1
EF-Ts_N
S1_RRP5
Qn_am_d_aIII
RNase_II_C_S1
Motif
Other DBs
NCBI-GeneID:
110611968
NCBI-ProteinID:
XP_021608252
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Position
3:complement(1967843..1973836)
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AA seq
1309 aa
AA seq
DB search
MTSIVSSSGTSISLIPGRVFTIKXNGLTKCSLPRKSLKHTLSSQRLVLPLLPSVGLFPLY
RRDCASLHRSILHKVSATETDTDVVVEEPESTVENEDSVGAAEIPADAVETSEKTSIRSD
ANPAPAQARRSRPSRKSEMPTVKNEDLIPGAKFTGKIRSIQQFGAFVDFGAFTDGLVHVS
RLSDSFVKDVGNVVSVGQEVTVKLVEVNMETGRISLTMRESDITNKPQERVDSPGTSGDK
PKPARRNTPKPSQRKEVKSSKFVKGQDLDGTVKNLTRSGAFISLPEGEEGFLPASEESED
GLLNMTGGSSLQVGQEVNVRVLRVARGQVTLTMKKEEDNDFDLEVSQGVVHVATNPFVLA
FRKNKDIAAFLDEREKIEIVAKEPVKPKTSVEVGQVNQTETVSGIPKVQDQDQPPSSDEE
LVCVSSTVVETVEDVEITPEELNVESSSSGDDEPESIESSTSQFVGEVVKPVEDPEATPK
DVAVGSSSAGDDEKPESIEPNSSQSVKGVLQTVEKEAEEGSVSTADKIIEKASSTDEVED
GKSGLTSSIVPVQNEGTGATSADEIGSISSSGGQADILPPQEAKESQDFGVVENQVDNVK
DELATQTSAADSEISSAIQVEDEKQVEKTKDEVEIQTSAAEAEIPSPEQVEIEKQVENTK
GEVEIQTSAAAAEIPSPEQVEIEKQVENTKGEVEIQTSAAAAEIPSPEQVEIEKQVENTK
GEVEIQTSAAAAEIPSPEQVEIEKQVENTKGEVEIQTSAAAAEIPSPEQVEIEKQVENTK
GEVEIQTSAAAAEIPSPEQVGNTKDEVEIQTSTIQAEIPSAIQVENEKVETVPDENGTSR
NSNAQGSSSSTQESVAKATISPALVKQLREETGAGMMDCKKALSETGGDIVKAQEFLRKK
GLVSAEKKASRATAEGRIGSYIHDSRIGVLVEVNCETDFVSRGDIFKELVDDIAMQVAAC
PQVQYLVTEDVPEEIVNKEKEIEMQKEDLLSKPEQIRSKIVEGRIRKRLEELALLEQPYI
KNDKLVVKDWVKQTIATIGENIKVRRFIRYNLGEGLEKKSQDFAAEVAAQTAAKTFTTPA
KEQPASAEAKETVQKPPTVTVSAALVKQLREETGAGMMDCKKALSETGGDLEKAQEYLRK
KGLSTADKKSSRLAAEGRIGSYIHDSRIGVLIEVNCETDFVGRSEKFKELVDDLAMQVVA
CPQVQFVSIEEVPESILNKEKELEMQREDLLSKPENIREKIVEGRVSKRLGELALLEQPF
IKNDSVLVKDLVKQTVAALGENIKVRRFVRFTLGEATEDAKSETETSDE
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atgacaagcatagtctcaagttcaggaaccagtatttctctcattcctggaagagtcttt
acaataaaanaaaatggtctcacaaaatgcagtttgccaaggaaatctttaaaacataca
ctatcctcacaaagactagtattacctcttctgccatctgttggattgttcccactatac
agaagggattgtgcatcacttcatagatctattttacataaagtatcggccacagaaact
gatactgatgttgtggttgaggagccagagtcaactgttgaaaatgaagactctgtcggt
gccgcagaaattccagcagatgcagttgaaacaagtgaaaaaacctccatcaggtcagat
gccaatcctgctccagctcaagcaagacgttcaagacccagtaggaaaagtgaaatgcca
acagtgaagaatgaggacctcattcctggtgcaaaatttactgggaaaataaggtcaatc
caacaatttggtgcttttgttgatttcggagctttcacagatggtctagtacatgtttcc
aggttaagtgatagctttgttaaagatgttgggaatgttgtatctgttggccaagaggtg
acagtcaaattagttgaagtgaacatggaaactgggcgtatttctcttaccatgcgtgaa
agtgatattaccaataagccacaggaacgggtagactctcctggcaccagcggtgacaag
ccaaagcctgctcggaggaacacaccaaagcctagccagagaaaagaagtgaagtcctcg
aagtttgtgaaagggcaggacctggatggcacggtgaagaacttgaccaggtctggtgct
ttcatctctctccctgagggtgaggaaggattcctgcctgcatcagaggaatctgaagat
ggacttctaaatatgacagggggctcatcactacaggttggccaggaagttaacgtaaga
gttttgcgtgttgcaaggggacaagttaccttgacaatgaagaaggaagaagacaatgat
tttgatctggaggttagccaaggggttgtccatgttgcaacaaatccatttgtgctggct
ttccgtaagaacaaggatattgctgcgtttttggatgagagggagaaaatagagatagtg
gcaaaagaacctgtgaaaccaaagacttcagtggaagtaggacaggtaaaccagactgaa
actgtatctggtattccaaaagttcaggatcaggatcagcctccaagcagtgacgaggaa
ttggtatgtgtctcttcaacagtggttgaaacagtagaagatgttgaaattactccagaa
gaactcaatgtggagtccagtagctctggcgatgatgagccagaaagcatagagtcaagc
acatcacaattcgttggagaagtggttaaaccagtagaggatcctgaagcaactccgaaa
gatgttgctgtgggatccagtagtgctggcgatgatgaaaaaccagaaagcatagagcct
aactcgtcacaaagtgttaagggggtgcttcaaactgttgagaaagaagcagaggaaggg
agtgtatctactgcagataagataattgagaaggcttcttcaacggatgaggtggaagat
ggaaaatctggcttaacttcttctattgtaccagttcaaaatgaaggcacaggagcaaca
agcgctgatgaaattggcagtattagtagctcaggcgggcaagcagatattcttcctccc
caagaagctaaagaaagtcaggattttggagtagtggagaaccaagttgataacgttaag
gatgaactggctactcaaacgtctgctgctgattctgaaatttcttctgcaatacaagtt
gaagatgaaaaacaagttgaaaagacaaaggatgaagtggagattcaaacatctgctgct
gaggcggaaattccttctcctgaacaagttgaaattgaaaaacaagttgaaaacaccaaa
ggcgaagtggagattcaaacatctgctgctgcggccgaaattccttctcctgaacaagtt
gaaattgaaaaacaagttgaaaacaccaaaggcgaagtggagattcaaacatctgctgct
gcggccgaaattccttctcctgaacaagttgaaattgaaaaacaagttgaaaacaccaaa
ggcgaagtggagattcaaacatctgctgctgcggccgaaattccttctcctgaacaagtt
gaaattgaaaaacaagttgaaaacaccaaaggcgaagtggagattcaaacatctgctgct
gcggccgaaattccttctcctgaacaagttgaaattgaaaaacaagttgaaaacaccaaa
ggcgaagtggagattcaaacatctgctgctgcggccgaaattccttctcccgaacaagtt
ggaaacaccaaggatgaagtggaaattcaaacatctactattcaggctgaaattccttct
gccatacaagttgaaaatgaaaaagtggaaactgtccccgacgaaaatggcacctccaga
aattcaaatgcacaaggcagcagttcttccactcaggagagtgtggctaaagcaactata
tcaccagctctggtgaagcagcttcgagaagaaacaggagcaggaatgatggattgcaaa
aaagccctttcagagactggaggggacattgttaaagctcaggagttccttaggaagaaa
ggattagttagtgcagaaaagaaagccagcagagccacagctgaaggaagaattggttct
tacattcatgatagcagaattggagtcctggtagaggtgaactgtgaaacagattttgtc
tccaggggtgacattttcaaggagctggtagatgacatagcaatgcaggtggcagcatgc
cctcaagtacagtatctcgttactgaagatgttcctgaagagattgttaacaaggaaaaa
gaaattgagatgcagaaggaagatctcttgtcaaaaccagagcagatcagatcaaagatt
gtagaaggacgaatcaggaaaagactcgaggagctggcattgttggaacagccatacatc
aagaacgacaagcttgtggtaaaggactgggtgaaacagacaatcgcaactattggtgaa
aatataaaagtgaggaggtttattcgctacaatcttggtgagggcctggagaagaaaagt
caggatttcgctgctgaggtggccgcacaaactgcagcaaaaacatttacaacaccagca
aaagagcagcctgcttcagcagaagccaaggaaactgttcagaagccgccaacagtaaca
gtttctgctgctcttgttaaacaactgagagaagaaactggagccgggatgatggactgc
aaaaaagcactgtctgaaactggaggggaccttgagaaggcacaggagtatctcagaaag
aaaggtctttcaactgctgacaaaaaatctagtcggcttgccgccgaaggcagaattggc
tcctatattcatgattcccgcattggagttctgattgaagttaactgtgaaactgacttt
gtgggtagaagtgaaaaattcaaggaattggttgatgatctagccatgcaagttgtggct
tgcccacaggtgcagtttgtgtccattgaagaagttccagagagcattttgaacaaggag
aaggagctggagatgcaaagagaggaccttttatcaaaaccagagaacataagagagaag
atcgttgagggcagagtttcaaagagacttggagagcttgctcttctagagcaacccttc
attaaaaatgacagtgttttggttaaagacttggtgaagcagactgttgccgctcttggg
gagaacataaaagtgcggcgattcgttcggtttactcttggggaggctactgaagatgca
aaatctgaaactgaaacctcggatgaataa
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