Manihot esculenta (cassava): 110612004
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Entry
110612004 CDS
T05761
Name
(RefSeq) protein argonaute 10
KO
K11593
eukaryotic translation initiation factor 2C
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110612004
03036 Chromosome and associated proteins [BR:
mesc03036
]
110612004
Messenger RNA biogenesis [BR:
mesc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
110612004
Chromosome and associated proteins [BR:
mesc03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
110612004
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
110612004
microRNA pathway
RISC loading complex
110612004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
110612004
NCBI-ProteinID:
XP_021608308
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All DBs
Position
3:29695157..29704452
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AA seq
990 aa
AA seq
DB search
MPIRQMKESSEQHLVIKTHLQNTMNQPQKHHKTPQNGKGPPSQETHSKSQTSPPTKNRGR
RRNRGGRKSDQGDVCMRPSSRPCTVAHKPVNPAGNPLARAPNGSVRNAGNICEMEMGLGF
PTSSKSLSFAPRPGYGQLGTKCIVKANHFFAELPDKDLNHYDVTITPEVASRAKNRAIMA
ELVRLYKESDLGRRLPAYDGRKSLYTAGELPFAWKEFVIKLVDEEDGINGPKREREYKVV
IKFVARANMHHLGQFLAGKRADAPQEALQILDIVLRELSTKRYCPIGRSFFSPDIRAPQR
LGDGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVIEFVAQLLGKDVLSRPLCDSD
RIKIKKALRGVKVEVTHRGNIRRKYRVSGLTSQPTRELVFPVDDNSTMKSVVEYFQEMYG
FTIQHTHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNERQITALLKVTCQRPRDREN
DILQTVQHNAYDHDPFAKEFGIKISEKLASVEARILPAPWLKYHETGKEKDCLPQVGQWN
MMNKKMINGMTVSRWSCINFSRSVQESVARGFCNELAQMCQVSGMEFNPEPVIPIYNARP
DQVEKALKHVYHASMNKTKGKELELLLAILPDNNGSLYGDLKRICETDLGLISQCCLTKH
VFKISKQYLANVSLKINVKMGGRNTVLLDAISCRIPLVSDIPTIIFGADVTHPENGEDSS
PSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWQDPVRGTVSGGMIRDLLVSFR
KATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTR
LFANNHRDRSSIDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDEN
NFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYTEPEMQENGSSGGGSG
YGTKGARAGETGVRPLPALKENVKRVMFYC
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgcctataaggcaaatgaaagagagctcagagcagcacttggtgataaaaacccacttg
cagaacacaatgaaccaacctcaaaaacaccataaaacccctcaaaatggcaagggaccg
ccatctcaggaaacccacagcaagagccagacctcacccccaacaaaaaacaggggaaga
agaagaaacagaggtggtagaaagtctgatcaaggagatgtctgtatgagacccagttca
aggccatgtactgtggcgcataagcccgtgaatccagcaggtaatcccttggcaagagct
ccaaatgggtccgttagaaatgctggaaatatttgtgaaatggagatgggtttggggttc
cctacttctagcaagtctttgagttttgctcctaggcctggttatggtcagctggggaca
aagtgtattgttaaggccaaccacttctttgcagagttaccagacaaggacttgaaccac
tatgatgttaccataactcctgaagtggcatcaagagctaaaaacagagctatcatggcg
gagctggtgaggctttacaaagaatctgacttgggaaggagacttcctgcttacgatggc
agaaagagtctgtatactgctggtgaacttccctttgcttggaaggagttcgtgattaaa
cttgttgatgaagaagatggaataaatggtcccaagagggaaagagagtacaaagtggtg
atcaagtttgtagcaagggccaatatgcatcacttgggtcaatttttagctggtaaacgt
gctgatgctccacaggaggctttacaaattcttgacattgtgctgagggagctctcaaca
aagaggtactgccccattggaagatccttcttttcaccggatattagagcaccacaacga
cttggtgatggcttggagtcctggtgtgggttttaccagagtataaggcctacacaaatg
ggcctatccttgaatattgatatggcttcagctgcattcattgagcctctcccagtaatt
gagtttgttgcacagcttctgggcaaggatgtattatcaaggccattatgtgattccgat
agaatcaagattaagaaggccctcagaggagtaaaagttgaagtaactcatagagggaat
atacggagaaagtatcgtgtctcaggattgacatctcaacctacaagagaacttgtattt
cctgttgatgataactcaactatgaagtcagtagttgaatatttccaagagatgtatgga
ttcaccattcaacatacgcatctaccttgccttcaagtaggaaaccagaagaaggcgaac
tatctacctatggaggcttgcaaaattgtggagggccaacgatatacgaaaaggttgaat
gagagacaaattactgccctgttgaaagttacatgccaaaggccaagggatcgagaaaat
gacattttgcagacagttcagcataatgcttatgatcatgatccttttgcaaaggagttt
gggatcaaaatcagtgaaaagctagcttctgttgaggctcgaattctccctgctccctgg
ctgaaatatcatgaaactggaaaggaaaaggactgcttgccacaagttggccaatggaac
atgatgaataagaaaatgattaatggaatgactgtgagccgatggtcatgtatcaacttt
tcaagaagtgttcaagaaagtgttgctcgggggttttgcaatgagcttgctcagatgtgc
caagtatctggcatggaattcaatccagagcctgttattccaatctataatgccaggcct
gatcaagtagaaaaagctttgaagcatgtttatcatgcttccatgaacaaaaccaaagga
aaagaattggagcttttattagctattctacctgacaataatggatccctatatggggat
cttaagcggatatgtgaaactgatcttggtttaatatcacaatgctgtcttactaaacat
gttttcaaaatcagcaagcagtatttggctaatgtatcactgaagattaatgttaagatg
ggtggtagaaacactgtccttttagatgccattagctgcagaataccattggttagtgac
ataccaactattatatttggagcagatgtaactcacccagagaatggggaggactcaagc
ccctccattgcagctgtggtagcttctcaggactggcctgaagtgacaaaatatgctgga
ttggtttgtgctcaagctcacagacaagaactcatacaagacttgtacaaaacatggcaa
gatccagttcgtggaactgttagtggtggcatgatcagagatcttctagtttcctttcgg
aaggcaacaggacaaaagccactaaggattatattttacagggatggtgttagtgaaggg
caattttatcaagttttgctttatgaattggatgcaatccggaaggcttgtgcttctcta
gaaccaaactatcaaccacctgtgactttcatagttgtacaaaaacgacaccatactcga
ttatttgctaacaaccacagggatagaagtagcatagataagagtggaaacatattaccc
ggcactgtggttgattcgaaaatctgccatccaacagagtttgatttttatctctgcagt
catgcaggtattcaggggacaagtcggcctgctcactaccatgttctgtgggatgagaac
aacttcactgctgacggaatccagtcattgacgaacaatttatgttacacatatgcaaga
tgcactcgctctgtttctgttgttcctcctgcatattacgcacatttagctgcttttcgt
gcccgattttacacggagccagaaatgcaggaaaatggctccagcggtgggggctcagga
tatggcaccaagggagcaagagcaggagaaacaggagtccggccattgcctgccttgaag
gaaaatgtgaagagagtaatgttttactgttaa
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