Manihot esculenta (cassava): 110612015
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Entry
110612015 CDS
T05761
Name
(RefSeq) uracil-DNA glycosylase, mitochondrial isoform X1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
110612015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mesc03400
]
110612015
Enzymes [BR:
mesc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
110612015
DNA repair and recombination proteins [BR:
mesc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
110612015
Prokaryotic type
110612015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
LED_rpt
Motif
Other DBs
NCBI-GeneID:
110612015
NCBI-ProteinID:
XP_021608331
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Position
3:complement(14491421..14499130)
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AA seq
328 aa
AA seq
DB search
MNWQIASKSSRVQSMASRKTLRDFLQPAKRLKPSSPSDPSKPLNLHISTTACKSITDSSS
SNLTTHQRSRIEFNKLRAKSKRNLNLCSQLVSKSKAEGVGYVKLEELLVEETWSKALPGE
LQKPYARNLCKFLENEICSGSVPIYPPQHMIFNALNSTPFDRVKAVIIGQDPYHGPGQAM
GLSFSVPEGVKIPSSLVNIFKELEKDLGCSIPSHGNLEPWAIQGVLMLNAVLTVRSHQAN
SHAKKGWEQFTDSVIKTISQKKEGVVFLLWGNFAQEKSRLIDGTKHYILKAAHPSGLSAN
RGFFGCRHFSQTNKLLEKMGIPPIDWQL
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgaattggcaaattgcctccaaatccagccgagtacaaagcatggcttctcgcaagacc
ctgagggatttcttacaacccgccaaacgtctaaagccgtcctctccttccgatccttca
aaacccctaaatctgcatatttccactactgcctgcaaatcgattactgattcttcctcc
tctaacctcactacccaccagagatctcgcattgagttcaacaaactccgtgccaagtcc
aagcgaaatctcaatctctgttcccaattagtttccaagtccaaagctgaaggtgtgggc
tatgtgaaattggaggagctgttggtggaggagacctggtcgaaagctcttcccggggaa
ttgcagaagccttatgctaggaatctctgcaaatttcttgagaacgagatttgtagtggc
agtgtgcccatatatcctcctcaacacatgatcttcaatgctcttaattccacccctttt
gatagagtgaaggctgttatcattggacaggatccttatcatggccctggtcaagcaatg
ggtctttccttctctgttcctgaaggagtgaagattccttcaagtcttgttaacatattt
aaggaactggagaaagatcttggctgttccattccatctcatggtaatctagaaccttgg
gccattcagggtgtactgatgctgaatgctgttcttacagttaggagtcatcaagcaaac
tcccatgctaaaaaaggatgggaacaattcacagattctgttatcaaaacaatttcacaa
aagaaggaaggagttgtttttctcctttggggaaactttgcacaagagaaatcgaggtta
attgacgggacaaagcattacattctgaaggcagcgcatccttctggtttatctgcaaac
agaggcttttttggttgcaggcatttttctcagacgaacaagcttttggagaaaatggga
attcctccaatagattggcaactttga
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