Manihot esculenta (cassava): 110612022
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Entry
110612022 CDS
T05761
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110612022
04121 Ubiquitin system [BR:
mesc04121
]
110612022
Enzymes [BR:
mesc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110612022
Membrane trafficking [BR:
mesc04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
110612022
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110612022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
Zf_IFT144_1st
zf-ANAPC11
zf-RING_UBOX
zf-C3HC4_3
Fer2_2
zf-RING_5
zf-RING_10
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
110612022
NCBI-ProteinID:
XP_021608347
LinkDB
All DBs
Position
3:17049917..17052327
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AA seq
389 aa
AA seq
DB search
MEEAMAAQYWCHMCSQMVNPIMEAEIKCPFCQSGFVEEMSSSTRENQEPDPDFSSDRALS
LWAPILLGMMGNPRRRRRYRRMDFEEEEDSDDGEPHHGGETELDRELESFMRRRRRSSAT
ILQLLQGIRAGMASESENSEGERNRDGDRDRERERVILINPMNRTVIVQGSYDSSNGQNQ
NHTPIGSLGDYFLGPGLDMLLQHLAENDPNRYGTPPAQKEAIEALPTVTIKETFQCSVCL
DDFEIGTEAKEMPCKHKFHSSCILPWLELHSSCPVCRFQLPADESKSDSERSRISIHRTE
SSNVDNNNSSSNGSNSSNSSNNHQHHGNSIEEGEEEGRNGNGRRFSFPWPFNSLFSSSSG
SQSSGNHSTSTSSSSLANAPGNASQRDEN
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagcaatggcagcccaatattggtgtcacatgtgttctcaaatggtcaatccc
attatggaagctgagattaaatgccccttttgtcaaagtggatttgtagaagaaatgagc
agtagcacaagggaaaatcaggagcctgatcctgattttagttctgatcgtgcactctct
ctttgggccccaatcttgcttggaatgatgggaaatccccgtcgacggagaagatataga
agaatggattttgaagaagaagaggacagtgatgatggtgagccacaccatggaggagaa
actgagttagaccgtgaacttgaatcattcatgaggaggaggagaagaagttcagctacg
atattacaattgcttcaaggaattcgagctggaatggcatctgaatcagagaattctgaa
ggagaaaggaatagagatggagatagagatagggaaagagaacgagtcattttgatcaat
cctatgaatcgaactgtcattgttcagggttcatatgattcaagcaatggtcaaaaccag
aatcacactcccattgggtcattaggtgattatttcttaggacctggtttggatatgttg
ttgcagcatttagcagagaatgatccaaacagatatggtactccaccagcacaaaaggag
gcaattgaggcattgcctactgtaacaatcaaggaaactttccaatgttcagtttgtttg
gatgattttgagattggcactgaggcaaaggaaatgccatgcaagcacaagtttcatagc
tcatgtatattgccatggctggaacttcatagttcttgcccagtttgcaggtttcagttg
cctgctgatgagtccaagtctgattctgagaggtctcggattagcattcatcggacagaa
agcagtaatgttgataataacaatagtagcagcaatggcagtaacagtagtaatagtagt
aataatcaccaacatcacggaaatagcattgaagagggagaagaggagggaagaaatgga
aatggtagaaggttttcatttccttggcctttcaatagtttgttctcatcttcctcagga
tctcaatccagtggaaatcattcaacctcaacttcatcatcctctttggcaaatgcccct
ggaaatgcttcccaaagagatgagaattga
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