Manihot esculenta (cassava): 110612054
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Entry
110612054 CDS
T05761
Name
(RefSeq) tryptophan--tRNA ligase, chloroplastic/mitochondrial isoform X1
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
110612054
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mesc01007
]
110612054
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mesc03016
]
110612054
Enzymes [BR:
mesc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
110612054
Amino acid related enzymes [BR:
mesc01007
]
Aminoacyl-tRNA synthetase
Class I (G)
110612054
Transfer RNA biogenesis [BR:
mesc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
110612054
Prokaryotic type
110612054
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
Motif
Other DBs
NCBI-GeneID:
110612054
NCBI-ProteinID:
XP_021608389
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Position
3:6368786..6376400
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AA seq
413 aa
AA seq
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MGRAILSPFLLLSNSPPRLSSSLSLAGFRREYLRSSRLIRRNARCFTGFRCHCSVSLSEP
AAPESSSSSVKKRIVSGVQPTGSIHLGNYLGAIKNWIALQNTYETLFFIVDLHAITLPYE
TQQLLRSTRETAAIYLACGVDTSKASVFVQSHVRAHVELMWLLSSATPIGWLNRMIQFKE
KSRKAGDENVGVALLTYPVLMASDILLYQSDFVPVGEDQKQHLELTREIAERINYLYGGR
RWKKLGGRGGAIFKVPEPLIPPAGARVMSLTDGLAKMSKSAPSDQSRINLLDSKDVIANK
IKRCKTDSFSGLEFDNPERPECNNLLSVYQLISGKTKEEVKQECQDMNWGMFKPLLTDAL
IDHLHPIQVRYGEIISDSAYLDKVLEEGATKAAEIADATLNNAYQAMGFLRRR
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgggacgtgcaattctttctccctttctcctcctctccaactcccctcctcgcctgtct
tcttcactgtcgctcgctggatttcgaagagaatatctgcgaagttcgaggctaattcgt
agaaatgcaagatgctttactggtttccgttgccactgcagtgtctcactttcggagccc
gctgctccggagagttcttcgagctctgtaaagaagagaatagtttcaggagtccagcca
acgggatctattcacctggggaattatcttggtgctataaaaaattggatagctcttcag
aatacatatgagactctcttcttcattgtcgacctccacgcgattacattaccatatgaa
acacaacaattgttgaggtctacgagggagacagcagcaatttatttggcatgtggtgtt
gacacttccaaggcttctgtatttgtgcagtctcatgttcgtgctcatgtagaactaatg
tggcttctaagttctgctacaccaattggttggctgaataggatgatccagtttaaagag
aaatcccgaaaagctggtgatgaaaacgttggggttgctcttttgacttatcctgttttg
atggcatctgatatacttctgtatcagtctgactttgtaccagttggtgaggatcaaaag
caacatctggaattgacccgtgagatagctgagcgcattaattatttatatggaggaaga
aggtggaagaaattaggagggcgaggaggtgctatctttaaggttcctgagccccttata
ccacctgctggagcccgagttatgtctttgacagatggtcttgccaagatgtccaagtct
gcaccttctgaccaatctcgaatcaatcttcttgactcaaaggatgtgatagcaaacaag
ataaaacgatgcaaaacagattcattttcgggcctagaatttgataaccctgaaagacct
gaatgcaacaatcttctttcagtatatcaacttatctcaggcaagacaaaagaggaagtt
aagcaggaatgtcaagatatgaattggggcatgttcaaacctctcctaacagatgcctta
attgaccatctacatcctatccaggttcgttatggagaaataatatcagattcagcttat
ttggataaagtcctagaagaaggtgctactaaagctgcagagatagcagatgccactctc
aataatgcataccaggcaatgggattcttgcggaggagatga
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