Manihot esculenta (cassava): 110612059
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Entry
110612059 CDS
T05761
Name
(RefSeq) AMSH-like ubiquitin thioesterase 3
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110612059
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mesc01002
]
110612059
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110612059
04121 Ubiquitin system [BR:
mesc04121
]
110612059
Enzymes [BR:
mesc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
110612059
Peptidases and inhibitors [BR:
mesc01002
]
Metallo peptidases
Family M67
110612059
Membrane trafficking [BR:
mesc04131
]
Endosome - Lysosome transport
Others
Others
110612059
Ubiquitin system [BR:
mesc04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
110612059
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
JAB
USP8_dimer
Prok-JAB
ATP-synt_D
Motif
Other DBs
NCBI-GeneID:
110612059
NCBI-ProteinID:
XP_021608398
LinkDB
All DBs
Position
3:complement(31780725..31786225)
Genome browser
AA seq
512 aa
AA seq
DB search
MKIDVNKIARKVEVDNRIPLRHYYRIADNLLRQANIHREEKNIVDLYTILLRYSSLVSET
IPYHRDYQILLPKERAAYKKRLFAVLDELEALKPEFHRRVDELNKAYARTQLHELDDPER
TYYGSDSSSKCPSVNKVSYSSISVKRPSVVAPQSSWRYSNNHTQVSSSNPPQLDKPLQKL
SISLPLPKQETLSRHSFLGPNGLRGQWRGPSAEIKVQYPSYTDLTSSENLSLDQAAQYSV
EGVKDSDSGSIASTMESVLSLDDGRWSRPVEEASPALINEAREDPFQFVGIRQPSPPPVL
AQVHDFSPIPPSKVADPRPGPAKSSQDVIPSSNSYQHLHVPVNLMEDFLRLAHANTQKNL
ETCGVLAGSLKNRVFHLTTLIIPKQESTSDSCQTVNEEEIFEVQDRLALFPLGWIHTHPS
QTCFMSSVDLHTHYSYQIMLPEAIAIVMAPTDESSPHGIFHLSDPSGVSVIRNCQQRGFH
PHEEPLDGSAIYEHCSHVYMNSNLKFEVVDLR
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgacgtcaacaaaatcgctcggaaagtagaggtcgataatcggattcctctc
cgtcactattacagaattgccgataatctcctcagacaggcaaatatacaccgcgaggag
aagaatattgtagatttgtatacaatacttctaagatattcaagtttggtgtctgaaaca
attccatatcaccgagattatcagattttgcttccaaaggaaagagcagcttataagaag
agattgtttgctgtcctagatgagcttgaagctttgaagccagaattccatcgaagagta
gacgagctaaacaaagcttatgctagaactcaactgcacgagcttgacgacccagaaagg
acttactatggttctgactcttcttcaaaatgcccatctgttaataaagtttcttactcg
agcatcagtgttaagcggccctctgttgtggcaccacagtcttcatggaggtacagcaac
aatcatactcaagtttcatcttcaaaccctcctcaacttgacaagcctttgcagaagcta
tctattagtttacctcttcccaagcaagagacgttgtccagacactcattcttagggcct
aacggtcttaggggtcaatggcgaggacctagtgcagagataaaggttcagtatccaagt
tataccgacttaacctcttctgaaaatttaagcctggatcaggctgcacaatacagtgtt
gagggagtaaaagatagcgattctgggagcattgcctctactatggaatcagtgctctct
ttagatgatgggagatggtcacgcccagttgaagaggcgtcccctgcattaattaatgaa
gcaagggaagatcctttccagtttgttggtattaggcaaccttcaccgcctcctgttctt
gctcaagtgcatgatttttctccaattcctccatcaaaagttgcagatccaagacctgga
cctgcaaaatcttcccaggatgtgattcctagctcaaattcatatcaacatttacatgtt
cctgtaaatttgatggaggacttcttgagattagctcatgcaaatacacagaaaaactta
gaaacatgtggtgttcttgctggttcactgaaaaacagggtcttccacctcactactctt
ataatcccaaagcaagagtcaacctcagattcgtgtcagacggtgaatgaagaagaaata
tttgaagttcaagatagattggcacttttccctcttggatggattcatacacatccatcg
cagacatgtttcatgtcatctgttgatctgcacactcattactcgtatcagatcatgtta
cctgaagcaattgcaattgtaatggccccgactgatgaatcaagtccacatggcatattt
cacttgtctgatccgagtggtgtatctgtgatccgaaattgccagcagaggggatttcat
ccccatgaggagcctttagatggaagcgcaatttatgagcactgctctcacgtctacatg
aattccaacttaaaatttgaagttgttgatcttcggtga
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