Manihot esculenta (cassava): 110612083
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Entry
110612083 CDS
T05761
Name
(RefSeq) vacuolar protein sorting-associated protein 54, chloroplastic
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mesc01009
]
110612083
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110612083
Protein phosphatases and associated proteins [BR:
mesc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110612083
Membrane trafficking [BR:
mesc04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
110612083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
COG2_C
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
110612083
NCBI-ProteinID:
XP_043810669
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All DBs
Position
3:10200527..10224128
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AA seq
486 aa
AA seq
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MFEVDGKMADVLRENAEAVFAACDAAHGRWAKLLGVRALLHPKLRLQEFLGIYNITQEFI
TATEKIGGRLGYSIRGTLQSQAKAFVDFQHEMRMTKIKAVLDQETWVEVDVPDEFQAIVA
SFFSYEALISGDIDDAQGIMTKRYGEVVTNNDGSILADTEAQNAPHPLMRMDSGEISLQS
TTQVKYAPVAEATESNRADVTSAQSNNNNAKERGKGASQTLVCGGVGYHMVNCGLILLKM
LSEYIDMNNFLPALSSEVVHRVVEILKFFNTRTCQLVLGAGAMQVSGLKSITSKHLALAS
QVISFTYAIIPEIRRVLFLKVPEIRKPLLLSEMDRVAQDYKVHRDEIHTKLVQIMRERLL
VHLRGLPQIVESWNRPEDADSQPSQFARSLIKEVGYLQRVLSRTLHEADVQAIFRQVVII
FHSQISETFSRLEISTPQAKDRLHRDVKHILGCIRSLPTDNFSNSGTPNWGQLDEFLIQK
FGAETG
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaagttgatggaaaaatggccgatgtattgcgagagaatgctgaagccgtcttt
gctgcttgcgatgctgctcatggaagatgggcaaaacttcttggggtccgtgctcttctt
catcctaagttgagattgcaggagtttttaggcatttacaacatcactcaagagtttatt
actgctactgagaagataggtggcaggttggggtatagtattcgtggaacactacaatca
caggccaaagcatttgttgatttccagcatgaaatgcgcatgacaaaaattaaggcagtg
cttgatcaagagacatgggtggaagttgatgtccctgatgagtttcaggccattgttgcc
tcatttttttcttatgaggcattgatatctggggacattgatgatgctcaaggtatcatg
acaaaaagatatggtgaagtggtcacaaacaatgatggttcaatactggctgacactgaa
gcacaaaatgctccacatccacttatgaggatggattctggtgagatatctttacagagc
accacacaagtgaaatatgctcctgtggctgaagcaacagaaagcaatagagcagatgtt
acttcagctcagagcaacaataataatgcgaaggagcgtggaaagggtgcctctcaaacg
cttgtatgtggaggtgttggttatcacatggtaaactgtggcttaatattgctgaagatg
ttgtcagagtacattgatatgaataattttttgccagcactgtcttcagaagttgtacat
cgtgttgtggagatattaaaattttttaatacgaggacttgtcaacttgttcttggagct
ggtgccatgcaggtgtctggattgaagtctattacttctaagcacttagcccttgcaagt
caagtcatcagttttacatatgctattattcctgaaatcaggcgagttcttttccttaaa
gtacctgagataagaaagccgttgctgctctctgagatggatcgtgtagcccaggattac
aaggttcaccgagatgaaatacatacaaagctggttcagataatgagagaaaggttgttg
gttcatttacgtggattacctcaaattgttgagagctggaatagacctgaagatgctgac
tcacagcctagtcaatttgctcgatctcttataaaggaagttggataccttcaacgtgtc
ttatctcgaactttacacgaggcagatgttcaagcaatttttaggcaagtggttataatt
ttccattcgcaaatttctgaaacattttcacggttagagatcagcactccgcaagcaaag
gacaggcttcatcgtgatgttaaacacattcttggatgcattaggtcattacctactgat
aactttagcaattctggtactcctaactgggggcaactcgatgaattcttgatacaaaag
tttggagctgaaactggttag
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