Manihot esculenta (cassava): 110612097
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Entry
110612097 CDS
T05761
Name
(RefSeq) U1 small nuclear ribonucleoprotein C
KO
K11095
U1 small nuclear ribonucleoprotein C
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110612097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mesc03041
]
110612097
Spliceosome [BR:
mesc03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
110612097
Complex B
110612097
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-U1
CLIP1_ZNF
Motif
Other DBs
NCBI-GeneID:
110612097
NCBI-ProteinID:
XP_021608455
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Position
1:38347548..38351396
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AA seq
209 aa
AA seq
DB search
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ
TAAFQQVGAAYNQHLLVQRPRLPVLPTPVMPVSGNPQLPVNAPLIPGIRPPVLPRPIPGA
PGYLSAPGMPQMLAPPGAPPLPGHANGMQRPPMVIPPTTVPGSTPASTASGAAPSMVPPA
TYQANPAAATSGSFDSFNSAPAVAPEANH
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgcctcggtattactgtgattattgtgacacttatttgacccatgattctccatctgtt
agaaagcaacacaacgcgggttacaagcacaaggcaaatgtgagatcctactatcaacag
tttgaggagcaacaaacccaaagtttaattgatcaaagaataaaagaacaccttggccaa
actgcagcattccagcaggttggagctgcatacaatcaacatttactggtgcagaggccc
cgtcttcctgttctgcctacaccagtaatgcctgtctcagggaatccgcagttacctgta
aatgcaccactaatccctgggattaggcctcctgttcttccaagacctatacctggtgct
ccaggttatttgtctgctccaggcatgccacaaatgttggcaccgcctggtgcacctccc
ttacctggtcatgcaaatggcatgcaaaggcctcccatggtgattcccccaacaactgtt
cctgggagtacaccagcatccactgcttctggtgctgctccttcgatggttccacctgct
acttatcaggcaaatccagcagcagccacaagtggaagctttgacagcttcaatagtgct
ccggctgtggctcctgaggctaatcattag
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