Manihot esculenta (cassava): 110612108
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Entry
110612108 CDS
T05761
Name
(RefSeq) uncharacterized protein LOC110612108 isoform X1
KO
K15082
DNA repair protein RAD7
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mesc03400
]
110612108
DNA repair and recombination proteins [BR:
mesc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
110612108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
110612108
NCBI-ProteinID:
XP_021608471
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Position
3:5148110..5154190
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AA seq
692 aa
AA seq
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MDLGKGKEVPFFDLNLPVQESLTGLGFQDSISFGFPQKVTEFNRLFGDNGSGSSFGGDLS
RVETDPDVQMTSYPSVRRRYSIEEKAKAKMDDGKGNFDFDFDIDIDLDLNLSFGAFGTCP
IETQIENIDVIDVSSCSSDEPVMLNTEPVEQNPLMEERLLPAEAMELEQESRHAFVSVIE
EETRINEEAERQRSIARIVAKRFAHPKQQQQQQQGTSDPEMTSQLSEVDSQSPFSLAMEA
IKKRNSRHNVHKKSLYGIFEPPFKWVPANNRDHNVFKRYVPKLLDICLDFIAKNADKIVS
LENIPDNLKHKLSQMVSCSRKVDARFVELLAENSPTEIRVWDTSRLTEEEFSKIFSACDT
KNLTVLQLDLCGLCMPDYVLYTTLARQSYTLSKLATLSLRGAHRLSDSGLSALAASAPVL
QSINLSQCSLLTSSSINDLASHFESTLRELYLDDCQNIDAMLILPALKKFKHLEVLSVAG
IRTVRDGFVIAMAETCGMNMKELVFANCVELSDISLKSVGKRCPNLCALDLSHLHNLTDK
ALQCLANGCQSIRKLKLCRNDFSDEAIAAFLEACGESINVLSLNNISRVENQTALSIAKC
SRNLLSLDLSWCRKLTNEALGLIVDSCSSLKVLKLFGCSQVTDVFLNGHSNSLVHIIGCK
MTPVLEHLDSFGPQETPLRYSPLMGVADQQSV
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggatttggggaaaggaaaggaggtacccttttttgatctcaatttacccgtccaggag
tctttaactggattagggtttcaggattccatttcttttggtttccctcagaaagtaacg
gaattcaaccgattatttggtgataatggtagtggtagcagttttgggggtgatttgagt
agagtggagacagacccagatgttcaaatgactagttatccgagtgtgaggaggagatac
tctattgaagaaaaggcaaaggctaaaatggatgatggtaaagggaattttgattttgat
tttgatattgatattgatcttgatcttaatctgtcttttggggcttttgggacatgccca
attgaaacacaaattgaaaatatagatgtaatcgacgtatcgtcatgcagtagtgatgag
cctgtaatgttaaataccgaacctgtagaacaaaaccctctgatggaggagcgtttattg
cctgcagaagcaatggagttagaacaggaatcacgtcatgcctttgtaagtgtcatcgaa
gaagaaacaagaataaatgaagaggcagaaagacagcgttctattgccagaattgttgct
aaaagatttgcacatcctaaacagcagcagcagcagcagcaaggaacgagtgacccagaa
atgactagtcaattgagtgaagttgattctcaaagtccattttcactggcaatggaagca
atcaagaagagaaattcaagacataatgtccataagaagtctttatacggtatatttgag
cctccgttcaaatgggttccggcaaataacagagatcataatgtttttaaacgctatgtt
cctaaactgcttgatatttgtctcgattttattgccaagaatgctgataaaattgtgtca
cttgaaaatattccggataacttgaagcataaacttagtcagatggttagctgttctaga
aaagtggatgcacgctttgtcgaacttcttgcagagaattcaccaactgagattcgggtg
tgggatacctcacggttgacggaagaggagtttagcaaaatttttagtgcttgtgatacc
aagaacttgactgtgttacaacttgatctttgtggactctgcatgcctgattatgtattg
tacaccactctagccaggcaatcatacactctttctaaattagccaccttatctctgaga
ggtgcacatcgtttatcggatagcgggctaagtgcactggctgcatctgcacctgtactg
cagtctataaatctgagccagtgctctcttctcacatctagtagcatcaatgacctagct
agtcattttgaatctactttaagggagctatatttagatgattgtcagaacatagatgcc
atgcttattcttccagcactgaagaaattcaagcatttagaagtgttgtcagtggcaggc
attcggactgttagggatggttttgtcattgcaatggctgaaacatgtggaatgaatatg
aaggagcttgtatttgctaattgtgtggaactgagtgacatatctcttaaatctgtgggc
aaacgctgccccaatttatgtgcccttgacctttcacatttgcataacttgacagataaa
gcattacaatgtctagccaatggttgccaatcaattcgtaaattgaaactttgccgcaat
gatttcagtgatgaagctattgctgcgttcttggaagcctgtggggagtctattaatgtg
ctttcactgaataacatcagtagggttgaaaaccaaacagccttatcaatcgcaaaatgt
tcaagaaacttgttgagtttagacttatcatggtgtcgaaaattaacaaatgaggcattg
ggattgatcgttgacagctgctcttcactgaaggtgctcaaactctttggttgctcccag
gttacggacgtctttttgaatggccactcaaactctctggtgcatatcattggatgcaag
atgacacctgttctggaacatctcgattcgtttggtcctcaagaaactccattaaggtac
tctccattgatgggtgttgccgatcagcagagtgtttga
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