Manihot esculenta (cassava): 110612130
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Entry
110612130 CDS
T05761
Name
(RefSeq) thioredoxin-like protein YLS8 isoform X1
KO
K12859
U5 snRNP protein, DIM1 family
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110612130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mesc03041
]
110612130
Spliceosome [BR:
mesc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
110612130
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DIM1
Thioredoxin
Thioredoxin_7
Thioredoxin_8
Motif
Other DBs
NCBI-GeneID:
110612130
NCBI-ProteinID:
XP_021608511
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All DBs
Position
3:complement(24678084..24680070)
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AA seq
142 aa
AA seq
DB search
MSYLLPHLHTGWAVDQAILAEEERVVIIRFGHDWDDTCMQMDEVLASVAEKIKNFAVIYL
VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVY
RGARKGRGLVIAPKDYSTKYRY
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacctattgccgcacttgcacacagggtgggccgtcgatcaggctattcttgcc
gaagaagagcgggttgtgatcatccgttttggccatgactgggacgatacgtgcatgcag
atggatgaagtcctggcgtcagttgctgagaagataaaaaactttgccgtcatttatcta
gtggacatcacagaggtaccggattttaacaccatgtatgagttgtatgatccatccacg
gtcatgttcttcttcaggaacaaacacattatgattgatcttggaactggaaataacaac
aagattaactgggctcttaaagacaaacaagagttcatcgacatagttgaaactgtttac
cgtggagcaaggaagggccggggtttggtcattgctccaaaagattattccaccaagtac
cgttattag
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integrated database retrieval system
