Manihot esculenta (cassava): 110612159
Help
Entry
110612159 CDS
T05761
Name
(RefSeq) asparagine--tRNA ligase, cytoplasmic 1
KO
K01893
asparaginyl-tRNA synthetase [EC:
6.1.1.22
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
110612159
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mesc01007
]
110612159
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mesc03016
]
110612159
Enzymes [BR:
mesc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.22 asparagine---tRNA ligase
110612159
Amino acid related enzymes [BR:
mesc01007
]
Aminoacyl-tRNA synthetase
Class II (A)
110612159
Transfer RNA biogenesis [BR:
mesc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
110612159
Prokaryotic type
110612159
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
WHEP-TRS
tRNA-synt_2d
Desulfoferrodox
Motif
Other DBs
NCBI-GeneID:
110612159
NCBI-ProteinID:
XP_021608551
LinkDB
All DBs
Position
3:2413651..2417497
Genome browser
AA seq
555 aa
AA seq
DB search
MGDEHDTKVLKHPFSDRVPIRSIVCRPDGGAGLTGQLVRIGGWVKTGREQGKGSFAFLEL
NDGSCPANLQVIVEKEVADLSSLVHTGACVSVEGVLKEPPEGTKQKIELRVEQVLHVGPV
DPAKYPIPKTKLTLEFLRDHIHLRPRTNTISAVARIRNALAFATHSFFQEHGFLYIHTPI
ITTSDCEGAGEMFQVTTLINEVEKIEKELIQNPPPSEADIEAAKLDVKEKGGAVAQLKSA
KASKEEIAASVAELTKAKENLSKLEERSKLKPGIPKKDGKIDYSLDFFSRQAFLTVSGQL
QVETYACTVSSVYTFGPTFRAENSHTSRHLAEFWMVEPEIAFADLEDDMNCAEAYVKYMC
QWLLDKCFDDMELMAKLYDKGCIDRLRMVASTPFKRISYTEAVKLLEEAVQGGKKFENKV
EWGIDLASEHERYLTEVLFQKPVIVYNYPKGIKAFYMRLNDDSKTVAAMDVLVPKVGELI
GGSQREERLDIIQQRIVDMGLPLEPYEWYLDLRRYGTVKHCGFGLGFERMILFATGIDNI
RDVIPFPRYPGRADL
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgggagacgaacacgataccaaagttctcaagcatcctttctccgacagggtaccaatt
cgatccattgtctgtcgccccgacggtggtgccggcctcactggccagcttgtgaggatt
ggtggctgggtgaagaccgggagagagcagggcaagggatcgttcgcgtttttagagttg
aacgatgggtcatgtccggccaacctgcaggttatcgtggagaaagaagtggcggatctg
agctcgcttgtgcacactggagcgtgcgtctctgttgagggtgtcctcaaggaaccacct
gaaggtaccaagcagaagattgagctccgagtagaacaagtgctccatgttggacccgtg
gacccggctaagtacccgattcccaaaacgaagctaacgcttgagttcttgagggatcat
attcatcttcgacccagaactaatacgatttctgcagttgctcgaattcgtaatgctctt
gcttttgctacccactcattctttcaagagcatggttttctatatattcatactccaatt
atcactactagtgactgtgaaggtgctggtgaaatgtttcaagtgactaccttgattaat
gaagttgaaaagatagaaaaggagctgattcagaatcctccaccatcagaggctgacata
gaagctgctaagcttgatgttaaggagaaaggtggggctgtggcccaattgaaatctgct
aaagccagtaaggaggaaatagctgcttcagtggctgaactgacaaaagcgaaggaaaat
ctctcaaagctggaggaaagatctaaacttaagcctggcattcctaaaaaagatgggaag
atcgattattcactagatttcttttcccgtcaagcatttttaaccgtctctggccagcta
caagttgaaacatatgcctgtaccgttagcagtgtctacacatttggaccaacttttcga
gctgagaactcccacacttccaggcatttggcagaattctggatggtggaacctgaaata
gcatttgcagatcttgaggatgacatgaactgtgcggaggcatatgtgaagtatatgtgt
cagtggctacttgataagtgttttgatgatatggaactgatggctaagctttatgataaa
ggttgcattgatcgactaagaatggttgcttctactcctttcaagcgcatttcatacaca
gaagcggtgaaactgctagaggaggctgtgcaaggtggtaagaagtttgaaaacaaggtg
gaatggggtatagatctggcatctgagcatgagagatacttgacagaggtattatttcag
aagcctgttatcgtctacaattacccaaaagggatcaaagcattttacatgaggctcaat
gatgattcaaagacagtagctgccatggatgttcttgtaccaaaggtgggagagttgatt
ggtggaagccagagagaggaacgcttggatattattcagcaaagaattgttgatatgggg
ctacctcttgaaccatatgagtggtaccttgacctgcgtcgctatgggactgttaagcat
tgtggatttggcttagggtttgaacggatgatactatttgccactggcattgacaacatt
agagatgtcattcccttccccagatacccagggagagcagatctgtga
DBGET
integrated database retrieval system
