KEGG   Manihot esculenta (cassava): 110612176
Entry
110612176         CDS       T05761                                 
Name
(RefSeq) cyclin-T1-4 isoform X1
  KO
K15188  cyclin T
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    110612176
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mesc03021]
    110612176
Transcription machinery [BR:mesc03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     110612176
    Brd4/P-TEFb complex
     110612176
    7SK RNP complex
     110612176
SSDB
Motif
Pfam: Cyclin_N Cyclin_C
Other DBs
NCBI-GeneID: 110612176
NCBI-ProteinID: XP_021608571
LinkDB
Position
3:complement(30306730..30315216)
AA seq 388 aa
MSFARNYHSQGGTLHDDRWSSFNRNNYNNRNRSMNTNRTNSYNHNWNYNHFHDFPGNFRD
HINNAYNYVNIPSGAPSLKRRKFSAGTWGDVGRHFVKHISYETTVPSTCNNSVPPARSNA
ETSTSTSCKRDRTKLEDDEPVFMSRDEIERHSPSRKDGIDALRETHLRYSYCAFLQNLGL
RLELPQTTVGTAMVLCHRFFVRRSHACHDRFIITVMLITNGLPLLQLIATAAIFLASKSE
ESPRPLNNVLRASCEIFHKQDMTFLSCLLPVDWFEQYRERVIEAEQMILTTLNFELDVQH
PYAPLTSVLNKLGFSQTVLVNLALNLVSEGLRSSLWLQFKPHHIAAGAAYLAARFLNFDL
ACHQNIWQEFQTTPAIIQDVAQQLMELF
NT seq 1167 nt   +upstreamnt  +downstreamnt
atgtctttcgctcggaattaccattcacaaggtggcactctccatgatgatcgttggtcc
tctttcaatagaaacaactacaataacaggaaccgaagtatgaacacaaataggaccaac
agttacaaccataactggaattataaccatttccatgacttccctggaaatttcagggac
cacattaacaacgcttacaattatgttaatattcctagtggtgctccatccttgaaaagg
agaaaatttagtgctggcacttggggagacgttgggagacattttgtgaaacacatcagc
tatgaaaccactgttccttcaacctgcaacaattctgtccctcctgcaagatcaaatgct
gagacatccacgtctaccagctgcaaacgtgaccgcacaaaattggaagatgatgaaccg
gtatttatgtcgagggatgagattgagagacactccccatcaagaaaagatggtattgat
gcactacgagaaacccatttgcggtattcttactgtgcattccttcagaatcttggactg
cggcttgagttgcctcaaaccactgttggtactgccatggttttgtgccatcgtttcttt
gttcgaagatcacatgcttgccatgatagatttattatcacagttatgctcatcacaaat
ggtctgccactgttgcagttaattgctactgctgctatttttcttgcttcaaagtctgag
gagtcgccacgccctttgaacaatgtactgagagcatcttgtgagatttttcacaagcaa
gatatgacttttttgtcatgtcttctccctgttgattggtttgagcagtatcgggagcga
gtgattgaagctgagcaaatgatactgacaactctaaattttgaacttgatgtgcagcat
ccatatgctcctcttacatctgtccttaacaaattagggttttcacaaactgttttggtg
aacttggccttgaacttggtcagtgaagggcttcggagctctctgtggcttcagtttaag
cctcatcatattgctgctggtgccgcttacctcgctgccaggtttttaaattttgatctg
gcttgtcaccagaatatttggcaggagtttcaaaccacaccggccattatccaagatgta
gcacagcagttgatggagctcttttaa

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