KEGG   Manihot esculenta (cassava): 110612198
Entry
110612198         CDS       T05761                                 
Name
(RefSeq) ras-related protein RABF2b
  KO
K07887  Ras-related protein Rab-5A
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc04144  Endocytosis
mesc04145  Phagosome
mesc04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    110612198
   04145 Phagosome
    110612198
   04148 Efferocytosis
    110612198
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mesc04131]
    110612198
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mesc04147]
    110612198
   04031 GTP-binding proteins [BR:mesc04031]
    110612198
Membrane trafficking [BR:mesc04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    110612198
 Endosome - Lysosome transport
    110612198
Exosome [BR:mesc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   110612198
  Exosomal proteins of other body fluids (saliva and urine)
   110612198
  Exosomal proteins of colorectal cancer cells
   110612198
  Exosomal proteins of bladder cancer cells
   110612198
GTP-binding proteins [BR:mesc04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    110612198
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU RsgA_GTPase Gtr1_RagA MMR_HSR1 TsaE ABC_tran AAA_16
Other DBs
NCBI-GeneID: 110612198
NCBI-ProteinID: XP_021608598
LinkDB
Position
3:13645407..13654895
AA seq 200 aa
MATAGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL
AGNKADLLDARKVTAEEAQVYAQENGLFFMETSAKTATNVNDVFYEIAKRLPRVQPAQNP
SGMVLMDRPAERTASTSCCA
NT seq 603 nt   +upstreamnt  +downstreamnt
atggccaccgccggaaacaagaacatcaatgcaaaattggtgcttcttggggatgttggt
gctggaaagtccagtcttgtgttgcgattcgtcaaaggacagtttgttgaatttcaggaa
tcaaccataggtgctgcctttttctcacaaacattggctgtgaatgacgcgactgtaaaa
tttgagatttgggatacagccggtcaggagaggtatcatagcttggctccaatgtactac
aggggagcagctgctgcaattattgtgtatgatataacaaatcaggcttcatttgaacgg
gcaaaaaaatgggtccaagagcttcaggcacaaggcaatccaaatatggttatggcactt
gctgggaataaagctgatttgctagatgcaaggaaggtaactgcagaagaagctcaagta
tatgctcaggagaatggccttttctttatggaaacatcagctaaaactgcaactaatgtc
aatgacgttttctatgaaatagcgaaacgactacctcgagtgcagccagcacagaatcct
tctggaatggttcttatggatagaccagcagaaaggacagcaagcacatcctgttgcgct
taa

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