Manihot esculenta (cassava): 110612198
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Entry
110612198 CDS
T05761
Name
(RefSeq) ras-related protein RABF2b
KO
K07887
Ras-related protein Rab-5A
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04144
Endocytosis
mesc04145
Phagosome
mesc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110612198
04145 Phagosome
110612198
04148 Efferocytosis
110612198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110612198
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mesc04147
]
110612198
04031 GTP-binding proteins [BR:
mesc04031
]
110612198
Membrane trafficking [BR:
mesc04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
110612198
Endosome - Lysosome transport
110612198
Exosome [BR:
mesc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110612198
Exosomal proteins of other body fluids (saliva and urine)
110612198
Exosomal proteins of colorectal cancer cells
110612198
Exosomal proteins of bladder cancer cells
110612198
GTP-binding proteins [BR:
mesc04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
110612198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
RsgA_GTPase
Gtr1_RagA
MMR_HSR1
TsaE
ABC_tran
AAA_16
Motif
Other DBs
NCBI-GeneID:
110612198
NCBI-ProteinID:
XP_021608598
LinkDB
All DBs
Position
3:13645407..13654895
Genome browser
AA seq
200 aa
AA seq
DB search
MATAGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL
AGNKADLLDARKVTAEEAQVYAQENGLFFMETSAKTATNVNDVFYEIAKRLPRVQPAQNP
SGMVLMDRPAERTASTSCCA
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgccggaaacaagaacatcaatgcaaaattggtgcttcttggggatgttggt
gctggaaagtccagtcttgtgttgcgattcgtcaaaggacagtttgttgaatttcaggaa
tcaaccataggtgctgcctttttctcacaaacattggctgtgaatgacgcgactgtaaaa
tttgagatttgggatacagccggtcaggagaggtatcatagcttggctccaatgtactac
aggggagcagctgctgcaattattgtgtatgatataacaaatcaggcttcatttgaacgg
gcaaaaaaatgggtccaagagcttcaggcacaaggcaatccaaatatggttatggcactt
gctgggaataaagctgatttgctagatgcaaggaaggtaactgcagaagaagctcaagta
tatgctcaggagaatggccttttctttatggaaacatcagctaaaactgcaactaatgtc
aatgacgttttctatgaaatagcgaaacgactacctcgagtgcagccagcacagaatcct
tctggaatggttcttatggatagaccagcagaaaggacagcaagcacatcctgttgcgct
taa
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