Manihot esculenta (cassava): 110612230
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Entry
110612230 CDS
T05761
Name
(RefSeq) E3 ubiquitin-protein ligase RHF1A isoform X1
KO
K19043
E3 ubiquitin-protein ligase RHF [EC:
2.3.2.27
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110612230
Enzymes [BR:
mesc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110612230
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110612230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_UBOX
zf-C3HC4
zf-RING_11
zf-RING_5
zf-C3HC4_2
zf-ANAPC11
zf-RING_Vps41
zf_RING_Vps8
zf-Nse
zf-HC5HC2H
zf-C3HC4_4
zf-C3HC4_3
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
110612230
NCBI-ProteinID:
XP_021608644
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All DBs
Position
3:30415596..30419303
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AA seq
393 aa
AA seq
DB search
MAICTSSSTSFSSYDNPIISAPADGSSSGAAVDDAFEDACSICLEPFSAQDPPTVTSCKH
EYHLQCILEWSQRSKECPICWQLLVLKDPACQELLAAVETERCLRSRNTSSTASINLPHF
HEDFDVEQDYYSDDSDSDEHIMQHLAAAASRAHYFRRRERQRSSEQGSSQFLIFNSASNV
PSAQQTHSSTEEGQDVYNGSSGGNLPTHLMPSEAVPSVAPPVVNVVSSAAINRDVHSKPR
VFTRPSPTDAPQNPSEVLSFSESIKSKWIAASARYKDSFSKSTRVMKEKLCARNNSVKEL
SKGVQREMSAGIAGVARMIERLDITSKRTGASSPVSDLRPGASDLFSKGKGMQENIITQS
FDEKSKEIAHAASMDVSSHVSCTVPGLNIQRDH
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggcgatttgcacttcctcttccacttccttttcatcatatgacaaccccatcatatca
gctcccgctgacggttcttcttcgggagctgctgttgacgatgcattcgaggacgcctgc
agtatctgtctcgagcctttttctgcccaagacccacccactgtcaccagctgcaaacat
gaatatcatcttcaatgcattcttgaatggtcacagagaagcaaagagtgtccaatatgt
tggcagcttcttgtcttgaaggatcctgcctgccaagaacttctggctgctgttgagact
gagaggtgtttaaggtcaagaaacacatcttctactgcatccataaacctacctcatttt
cacgaggattttgatgtagaacaggattactattcagatgactcagattctgatgagcat
attatgcagcatctggcagctgctgcaagcagagctcattatttccgcagaagggagagg
cagagatcttctgaacagggttcctcccagtttctcatctttaactcagcttcaaatgta
ccaagtgcacagcaaacgcacagttctactgaagaaggccaggatgtatataatgggtct
tctgggggtaatttgccaactcatctcatgccatcagaagctgtgccatctgtggcccct
cctgttgtgaatgtggtctctagtgctgctataaacagagacgttcattccaaacccaga
gttttcactagaccatcaccaactgatgctccccaaaatccttctgaggtgttgtctttc
tcagagtccattaaatctaaatggattgctgcttcagccagatacaaggattcgttctct
aaaagtactcgggttatgaaggagaagctatgtgcacgtaataattcagttaaggagctc
agcaaaggagttcagagggagatgagtgccggtattgctggcgttgcacgaatgattgaa
cgactagatattacctcaaaacgaactggagcctccagtccagtttcagatttgaggcca
ggagcatcagatctcttctcaaagggaaagggcatgcaagagaacattatcactcagtca
tttgacgaaaaaagcaaggaaattgcacatgctgcaagtatggatgtttcttcacatgtc
tcctgcacggtcccaggtctgaatatacagagagatcattga
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