Manihot esculenta (cassava): 110612365
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Entry
110612365 CDS
T05761
Name
(RefSeq) syntaxin-52
KO
K08503
syntaxin of plants SYP5
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
110612365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110612365
Membrane trafficking [BR:
mesc04131
]
SNARE
SNAP-25[C] (Qc)
STX8
110612365
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SNARE
STX6_10_61_N
NPV_P10
LIF_OSM
Hemerythrin
SPAM
CLZ
Tropomyosin
FUSC
XhlA
Motif
Other DBs
NCBI-GeneID:
110612365
NCBI-ProteinID:
XP_021608827
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All DBs
Position
3:complement(26164765..26168285)
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AA seq
233 aa
AA seq
DB search
MASSTDPWMKEHNEAAKLAEDINGMIAERSSFPASGPDTQRHASAIRRKITILGTRLDSL
QSLLTKLPGKQKISEKEMNRRRDMVANLRTKVNQMASTLNMSNFANRDSLLGPEIKPADA
MRRTEGLDNHGIVGLQRQIMKEQDEGLEKLEETVTSTKHIALAVNEELDLHTRLIDDLDQ
HVDVTDSRLRRVQKNLAVLNKRTKGGCSCLCMLLSVVGIVGLVVVIYLLIKYL
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atggcatcttctacagacccatggatgaaggaacataatgaagctgcaaagcttgcagag
gatatcaatggcatgattgcagaaaggagttcttttcctgcatcagggcctgacacacag
cgtcatgcatctgctattcggaggaagattacaattttagggacaaggcttgatagctta
cagtcccttttgacaaagcttcctgggaagcagaaaatatcagagaaagagatgaatcgt
cgcagggacatggttgcaaatttgagaacaaaagtaaaccaaatggcttccacattgaat
atgtcaaactttgccaacagggatagcttgttgggtccagaaataaagccagctgatgcc
atgcgtagaactgaaggtctggacaaccacggcattgtcggtcttcagcggcaaattatg
aaagagcaagatgagggccttgaaaagttggaggagacagtaacaagtacaaaacatatt
gcactggcagtcaatgaagaacttgatcttcacactagacttattgatgacttggatcaa
cacgtggatgttactgattcccgcttacggcgagtgcagaagaatctggccgtgctgaac
aagcgtacaaagggaggctgctcctgcttgtgcatgcttttatctgttgtcgggattgtg
ggtctggttgtcgtcatatatttactgataaaatatctgtaa
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