Manihot esculenta (cassava): 110612402
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Entry
110612402 CDS
T05761
Name
(RefSeq) autophagy-related protein 18a isoform X1
KO
K22991
WD repeat-containing protein 45
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110612402
Membrane trafficking [BR:
mesc04131
]
Autophagy
Other autophagy associated proteins
Others
110612402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_HPS5
BCAS3_WD40
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WDR55
Beta-prop_WDR19_1st
Beta-prop_Vps41
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_IFT140_2nd
Beta-prop_RIG_2nd
PEP5_VPS11_N
DUF7099
Beta-prop_TEP1_2nd
Ge1_WD40
Beta-prop_IFT80_2nd
Motif
Other DBs
NCBI-GeneID:
110612402
NCBI-ProteinID:
XP_021608872
LinkDB
All DBs
Position
1:38533912..38537860
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AA seq
437 aa
AA seq
DB search
MATLSAYSPPWPNANPNGNLLSPEDAAEGLESVSQSQSYDSLSSIMPQDHLTDQLTPVNP
TPSYSAPVSVSVSSPPESTSAPATVSLLHVSFNQDFGCFAAATDHGFRIYNCDPFREIFR
RDFDRGGGGIGVVEMLFRCNILALVGGGSDPQYPPNKVMIWDDHQSRCIGELSFRSEVRS
VKLRRDRIIVVLEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGAGSLVLVCPGLQKGQ
VRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATASTKGTLVRIFNTADGTLLQEVRRG
ADRAEIYSLAFSSTAQWLAVSSDKGTVHVFSLKINPGSPVTDKSRNTPDHNAAVTSPSSS
LSFFKGVLPKYFSSEWSVAQFRLVEGSQYVVAFGHQKSTVVILGLDGSFYRCQFDPVNGG
EMTQLEYHNFLKPEATF
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcgactctctccgcgtattctcctccatggccaaatgcaaaccctaacggtaatctt
ctctctccggaagatgccgccgaaggactcgagtcagtatcacaatcccaatcttacgac
tcgctttcttcaattatgcctcaagatcatcttacggatcagctaactccagtcaatcct
acccccagttatagtgcccctgtgtctgtgtctgtgtcttcaccacctgagtccacctcc
gcgccggcgactgtttctctacttcacgtttcattcaatcaagattttggatgtttcgcg
gcggccacggaccacgggtttcgcatctacaactgtgatcctttccgggagatcttccgc
cgggactttgatcgtggcggaggtgggatcggagtcgtagagatgcttttccgttgtaat
attttggcccttgttggcggtgggtccgaccctcagtatcctcctaacaaggttatgatc
tgggacgaccatcagagccgctgcatcggggagctctcgttcaggtctgaggttcgatca
gtgaagcttagacgggatagaattattgtggtcctggagcagaagatttttgtgtataat
ttcgcggatttgaagctattgcatcagattgagacgattgcaaatcccaaagggctctgt
gcagtgtcgcagggggcgggttcattggtgttggtttgtccagggttgcagaagggccag
gttagggtggagcattacgcgtcgaaacggaccaagtttattatggcacatgattcgaga
attgcctgtttcgctctcacgcaggatgggcagttgcttgccactgccagcacaaaggga
actctggttagaattttcaacacggctgatggtactctgcttcaagaggtaagaaggggt
gctgatagagcagaaatttatagtttggcattctcttcaactgcccagtggctggcagtc
tcaagtgacaagggtactgtccatgttttcagccttaagattaatcctggatccccagtg
actgacaagtcacgaaatacacctgatcataatgctgcagttacatctcctagctcatct
ctgtccttctttaaaggtgttttgccaaagtatttcagttcagagtggtcagtggctcag
tttcgcttagttgagggttctcagtacgttgttgcatttggtcaccaaaagagtacagtg
gtaattcttggcttggatggaagcttctatcgatgtcagtttgacccagtgaatggcgga
gagatgacccaactggaatatcacaacttcttgaagccagaagcaaccttctga
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integrated database retrieval system
