Manihot esculenta (cassava): 110612411
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Entry
110612411 CDS
T05761
Name
(RefSeq) pumilio homolog 24
KO
K14844
pumilio homology domain family member 6
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110612411
03009 Ribosome biogenesis [BR:
mesc03009
]
110612411
Messenger RNA biogenesis [BR:
mesc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
110612411
Ribosome biogenesis [BR:
mesc03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
110612411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPL
PUF_NOP9
PUF
Motif
Other DBs
NCBI-GeneID:
110612411
NCBI-ProteinID:
XP_021608885
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Position
3:complement(31640980..31646226)
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AA seq
640 aa
AA seq
DB search
MAAKKHDGNKLKKRKQNPDVKNRTDSSASKKPKLVSSDTQTERLKKPFKPSKKAHNPSKL
IKSESGKEKHEPQTKRERRLHAKELAEARKKKRKRHYTLEQELASLWEKMRQRNIAKEER
SKLISEALQKMKGKIPEIASSHVSSRVLQTCVKYCSQTERDSVFEELKPHFLNFACNTYA
VHLVNKMLDNASKKQLSEFILNLHGHVASLLRHMVGSVVIEHAYQLANATQKQELLMELY
STELQLFKDLTLMKESRLLDVIAKLNLQKGSVLRHMTAVVQPILEKGIVDHSIIHRVLIE
YFSIVDKSSAAEVIQQLSGPLLVRMIHTKDGSRIGMLCIKHGSAKERKKIVKGMKGHMGK
IAYDQYGSTVLAYIVSTVDDTTLVTKTVIRELQPILKELALDKNGRRPLLQLLHPNCSRY
FSPDEMAAFNLTIPSLNAKDGESGDEDNSTKLTVVGTKESASPENVQLIDGGKKDPYLRR
KELLVENGLAEKLIDVCIENAGELLRSNFGKHVLYEVATGGAGGILHPVLDDKLNALHEA
IASLVAEPKSEEEHVLENFHSSRTIRRLIIDSPTFATTLWIKALKGNCGLWAQGHSSKVI
YAFLESSDVKIKERANKELQPLIDGGILKKPENKQPGKEG
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgaagaaacacgatggcaacaaattgaagaagagaaagcaaaacccagatgtc
aagaatcgaacagatagttcagcgtccaaaaaaccgaagcttgtaagctccgatacccag
acggagagattgaagaaacctttcaagccctcgaagaaagcacataatccgagcaagttg
ataaaatcagaatccggtaaagagaagcatgagccccaaacaaagagagagcgacgactt
catgccaaggaattagcagaggctaggaagaagaaaaggaagcggcattacactctggag
caagaacttgcttctctctgggagaagatgaggcagcgaaatattgccaaagaagaaaga
tctaagttaattagtgaagctttacaaaagatgaagggcaagattccagaaattgctagt
tcccatgtttcttcgcgtgttttgcagacctgcgttaagtattgctcacaaactgaaaga
gattctgtatttgaggagcttaagccgcattttcttaacttcgcatgcaacacatacgca
gttcatctagtaaataagatgttagataatgcttctaaaaaacagctgtcagagtttatc
ttgaatctccatgggcatgttgcttctcttcttcgacacatggttggatctgttgtcatt
gagcatgcataccaacttgcaaatgcaactcaaaaacaagagcttcttatggagttatat
tctactgagcttcagttgttcaaggaccttaccttaatgaaagagagcagattgcttgat
gtgattgcaaagctgaacctacaaaagggttcagtcttgcgacacatgactgctgtggtt
caaccaattcttgaaaaaggaatagttgaccactctatcatacacagggtactgatagag
tacttcagcattgttgataagtcctctgcagcggaagtaattcagcaattatcaggtcca
cttcttgttcgaatgatccatacaaaagatggatcaaggattggtatgctctgtattaaa
catgggagtgctaaggaaagaaagaagattgtgaaaggaatgaaaggccatatgggcaag
atagcgtatgatcaatatgggagcacggtacttgcctacattgtttcaactgttgatgac
acaacgcttgttacaaagactgtcatacgtgaacttcaaccaattttgaaggagcttgct
ttggataagaatggaaggcgcccattgctgcagcttctccatccaaattgttcacgttat
ttcagtcctgatgaaatggctgctttcaatttaactattccctctctcaatgccaaggat
ggagaatctggagatgaggacaatagtacgaaacttacagtggttgggaccaaggagagt
gcaagtcctgagaatgttcaattaattgacggtggaaaaaaagatccttatcttagaagg
aaagaattgctggttgagaatggccttgctgagaaactcattgacgtatgtattgagaat
gcaggagagttgctcagatcaaattttggcaaacatgtgttgtatgaggttgcaactggg
ggtgctggtggcattctccacccagtgttggatgacaagttgaatgctttgcatgaagcc
atagcatcacttgtggcagagcctaaatctgaagaggagcatgtcttagaaaatttccac
tccagtcgaaccattagaagattaatcatagatagccctacctttgctactactttatgg
ataaaagctttgaaagggaactgtggattgtgggcccaaggtcacagttcaaaagtaata
tatgcattcttggaatcttcggatgtcaaaatcaaagaacgagccaataaagagcttcag
ccattgatagatggcggtattctcaaaaaacctgagaacaagcaaccaggaaaagaaggg
tga
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