Manihot esculenta (cassava): 110612446
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Entry
110612446 CDS
T05761
Name
(RefSeq) cysteine--tRNA ligase, chloroplastic/mitochondrial isoform X2
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
110612446
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mesc01007
]
110612446
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mesc03016
]
110612446
Enzymes [BR:
mesc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
110612446
Amino acid related enzymes [BR:
mesc01007
]
Aminoacyl-tRNA synthetase
Class I (G)
110612446
Transfer RNA biogenesis [BR:
mesc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
110612446
Prokaryotic type
110612446
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
tRNA-synt_1
CysS_C
tRNA-synt_1f
DALR_2
DUF6825
Motif
Other DBs
NCBI-GeneID:
110612446
NCBI-ProteinID:
XP_021608929
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All DBs
Position
3:complement(1075373..1079813)
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AA seq
579 aa
AA seq
DB search
MGSLIKCYKPLTSFRFSPPPHSLLRSIQFRTHSSRTFSFSFSRKRTLCCLFSSLSSSWPL
INDKVNAGDGAITSSLSSAELWLYNTMSRKKELFKPKVEGKVGMYVCGVTAYDLSHIGHA
RVYVTFDVLYRYLRHLGFEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHHDMV
YLHCLPPSVEPRVSDHMPQIIDMIKQILDSGCAYRMDGDVYFSVEKFPDYGQLSGRKLED
NRAGERVAVDARKKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFD
IHGGGMDLVFPHHENEIAQSCAACRDSSISYWVHNGFVTVDSEKMSKSLGNFFTIRQVID
LYHPLALRLFLLGTHYRSPINYSDIQLESASERIFYIYQTLHDCETVISQHDMAFEKDSI
PPDILDGINRFHNVFVTSMSDDLHTPVLLAAFSDPLKIINDMIHTRKGKKQAKRIESLVA
LEKIVKNALSVLGLMPTRYSEVLQQLREKALKRAKLTEDQVLQKIEGRAVARKNRDYEKS
DAIRKDLATLGIALMDSPDGTSWRPAVPLALQQQQVAAS
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtctcatcaagtgctacaagcccctcacctctttccgcttctctccgccaccg
cactctctgctacgttcaattcaatttcgaactcactcttctcgcaccttctccttctcc
ttctccaggaagagaaccttatgttgtcttttcagctctctaagctcatcttggccctta
atcaacgacaaagttaatgctggtgatggagcaatcacctcatcactatcatcggcggag
ctgtggctttacaatacaatgagcagaaagaaggagctttttaagcccaaagtggaggga
aaagtcggaatgtacgtttgtggtgttactgcttacgatcttagccatattggccacgct
cgcgtctacgtcacttttgatgttctctacagatatctcaggcatttgggatttgaagtg
tgctatgttcgaaatttcactgatgttgatgataagataattgcccgagccaatgaattg
ggagaggatccaatcagtttgagcaggcgttactgtgaagaattccaccatgatatggtg
tatcttcactgcctgcccccttctgttgagccacgcgtgtcagatcacatgccccaaata
attgacatgatcaagcagattcttgatagtgggtgtgcctacagaatggatggggatgtt
tacttctcagtagaaaaatttcccgattatggacaattatctgggcgaaaattagaagat
aatagagcaggtgagagagtggctgttgatgcgaggaagaaaaatcctgctgattttgca
ttgtggaagtctgcaaaggaaggtgagccgttttgggagagtccatgggggcctggaaga
cctggatggcatattgagtgcagtgccatgagtgctgcttatcttggccactcttttgac
atccatggtgggggaatggaccttgtgtttccccaccatgaaaatgagattgctcagagt
tgtgctgcatgcagagatagtagtataagctactgggtgcataatggctttgtcactgtt
gactctgagaaaatgtccaaatcactcggaaacttttttacaattaggcaggttatagat
ctttatcatccactggctttgagacttttcttgttgggaacccactatcgatctccaatc
aactactctgatatacagcttgagagtgcttcagaacgcattttctacatatatcagaca
ttacatgattgtgaaactgtaatcagccagcatgacatggcttttgagaaggattctatc
ccccctgatattttggatggcattaataggttccataatgtgttcgttacctcaatgtca
gatgatcttcacacccctgttttgttggctgcattttctgatccattaaaaatcatcaat
gatatgatacataccagaaaggggaagaaacaggcaaagagaatagaatcacttgttgct
ttagaaaagatagtgaagaatgctttgtctgtcttggggttgatgcccacaagatactca
gaggttctgcagcaattaagggaaaaggcactgaagcgtgcaaagttaacagaagaccaa
gtattgcaaaaaattgaaggaagggctgtagcgaggaagaatagagactatgaaaaatca
gatgccattaggaaggatttagcgactttgggaattgcacttatggatagtccagatggc
acaagttggagaccagctgttcctcttgcactgcaacagcagcaagttgctgcatcttga
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