Manihot esculenta (cassava): 110612553
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Entry
110612553 CDS
T05761
Name
(RefSeq) probable beta-D-xylosidase 5
KO
K15920
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00520
Amino sugar and nucleotide sugar metabolism
mesc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
110612553
Enzymes [BR:
mesc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
110612553
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_3_C
Glyco_hydro_3
Fn3-like
Motif
Other DBs
NCBI-GeneID:
110612553
NCBI-ProteinID:
XP_043811537
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Position
4:17811334..17814233
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AA seq
794 aa
AA seq
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MARAAYTLLSLVAFLVVCNARPALITDVPTNYTHVCEPTRFAVQGLKMAEFGYCDSSLSF
DMRAKDLVDRMTLEEKVQQLGNFAAGASRLGLPAYEWWSEALHGVSNTGPGTFFDETVPG
ATSFPTVLLTTASFNQSLWKRIGQVVSSEARAMYNLGRAGLTYWSPNINVVRDPRWGRIQ
ETPGEDPYIVGTYASTYVRGLQDIEGTENITDLNSRPLKVAACCKHYTAYDIEDWMGVDR
FHFDARVTEQDMLETFQLPFEMCVKDGDASSVMCSFNRINGVPVCADKKLMQDTIRGDWD
LHGYIVSDCDSIEVMVDGHKWLGDTQEDAVSQVLKAGLDLDCGDYYPKSLKKAVMQGQVS
EAEVDKSLKYLYVVLMRLGYFDGSRFNSLGKKDICTHENFELAAEAAKEGIVLLKNDNET
LPLNSSKYKKLALIGPHGNATKAMIGNYAGVPCRYVSPIEGFSAFGEVKYEMGCGDVACK
NDSLIFPAMEAAREADATILVVGLDLSVEAEGRDRVDLLLPGYQNLLINQVSKASKGPVI
LVIMTAGGVDISFAKESTNIQSILWAGYPGQEGGRAIADIVFGKHNPGGRLPLTWYEAEY
ANLVPMTSMTLRPIVNPVANLSYPGRTYKFFNGSTVYPFGYGLSYTNFNYKIAPSKTLIK
IKLNKYQHCSNLNYEYTDDKPYCPAVLVDDCSCEQEFGIAVTVKNVGKMDGSEVVMVYSK
PPKGIKETHAKQVIGFERVFVQAGGETKTKLRFNVCKSLAIVDKKGYKVLPSGLHTIMVG
DANVSFFVSVQYYK
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggcaagagctgcttataccctgctttctcttgttgctttcttagttgtttgcaatgct
agacccgcattaatcactgatgtccctactaactacacccatgtttgtgagcctacaaga
tttgctgtacaaggtctgaaaatggctgagtttggctattgtgactcttccctatcattt
gacatgagggctaaagatttagtggatagaatgaccttagaggagaaggtgcaacagttg
ggaaattttgctgccggtgcatctcgattaggattaccagcttatgagtggtggtctgag
gccttgcatggtgtctctaataccggtccagggacattctttgatgaaactgttcccggt
gcaacaagtttccctactgttttacttacaactgcatcctttaaccaatctctctggaaa
agaattggccaggttgtttcatctgaagccagagcaatgtacaacttaggaagagctgga
ttaacatattggagcccgaatataaatgtggtaagggatcccagatggggaagaattcaa
gagacaccaggggaggatccatatattgttggaacatatgcctcgacttatgtaagaggg
cttcaagacattgaaggaaccgaaaatatcacagatttgaactctagacctctcaaagtt
gctgcttgttgtaagcattatactgcttatgatatcgaagactggatgggcgttgatcga
tttcattttgatgcaagggtgactgagcaagatatgttggagacatttcaactaccattc
gaaatgtgtgttaaagacggtgatgcaagcagtgttatgtgttcttttaatcgcattaat
ggtgtccctgtttgtgctgataagaaacttatgcaagacacaattagaggagactgggat
cttcatgggtacatagtttcagactgtgattcaattgaggtgatggttgatggccataaa
tggcttggggacactcaagaggatgctgtttcacaagtcctgaaggcaggattggacctt
gactgtggagattattatcccaagtctctaaagaaagctgtgatgcaaggacaagttagt
gaagcagaggttgacaaatcattaaaatatctatatgttgtcctaatgaggctaggatac
tttgatgggagtcgtttcaattcacttggcaagaaggatatttgcactcatgagaatttt
gaattagcagcggaagcagctaaagaaggaattgttcttcttaaaaatgacaatgaaact
ttgcctttgaattcttccaaatacaagaaacttgctttaattggaccacatggcaatgct
acaaaagcaatgattggaaattatgcaggcgttccttgccggtatgtttctccaattgaa
ggattctctgcatttggagaggtcaaatacgaaatgggatgcggagatgttgcttgcaaa
aatgatagtttgatctttccagcaatggaagctgcacgtgaagcagatgccacaatttta
gtggtgggcttggacttgtctgttgaagctgaaggcagggacagggtggatctcctcctc
ccaggttaccagaatctattgatcaatcaagtttctaaagcctctaaaggaccagtgatc
cttgtaattatgacagcaggtggagttgatatctcttttgccaaggagagtacaaacata
caatccatcttgtgggctggatatcccggccaagaaggtggtcgagccattgctgatatt
gtttttggaaaacacaatcctggcggaagattaccactcacatggtatgaagccgaatat
gctaatttggtacccatgacatctatgacactaaggccaattgttaacccagttgctaat
ttgagctaccctggaagaacatacaaattcttcaatggatcaacagtttacccatttggg
tatggtcttagctacaccaacttcaactacaagatagcaccctcaaagactttaatcaag
ataaaattgaacaagtaccaacattgcagcaacttgaattatgaatatactgatgataag
ccatattgtccagctgttttggttgatgactgttcttgtgaacaagagtttggaattgca
gttacagttaaaaatgtaggtaaaatggatgggagtgaagtggtaatggtttactcaaag
cctccaaaggggatcaaagaaactcatgccaaacaagtgattggttttgaaagggtattc
gttcaagcaggcggggaaacgaagacaaagcttagatttaatgtatgtaagagcttagca
attgtggataaaaaaggttacaaggttttgccgtctggtttgcacaccattatggtggga
gatgctaatgtctcattttttgttagtgtgcagtattacaagtag
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