KEGG   Manihot esculenta (cassava): 110612783
Entry
110612783         CDS       T05761                                 
Name
(RefSeq) Golgi SNAP receptor complex member 1-1 isoform X1
  KO
K08495  golgi SNAP receptor complex member 1
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    110612783
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mesc04131]
    110612783
Membrane trafficking [BR:mesc04131]
 SNARE
  SNAP-25[N] (Qb)
   Gos1 (Gos28)
    110612783
SSDB
Motif
Pfam: V-SNARE_C Sec20 Baculo_PEP_C P22_AR_C SYCE1 TENA_THI-4 Ino80_Iec3 DUF2408 Not3 CoV_S2 YidB ZNF380_CC COG5_N TALPID3 DUF6877 AI-2E_transport Glyco_hydro_67N Bap31_Bap29_C Med28 PIN_8 Laminin_II Spc24 Sec10_N DUF6261 DUF4407 MnmE_helical
Other DBs
NCBI-GeneID: 110612783
NCBI-ProteinID: XP_021609273
LinkDB
Position
4:30922724..30928194
AA seq 224 aa
MDLPSSWDALRKQARKLEAQLDEQMNSYRKLVSAKASTKVATAVNDLESGLDQLLKQLQQ
VNSQMQAWVSSGGSEMVSHTLTRHQEILQDLTQEFHRLRSSLRAKQQHASLLEDFREFDR
ARLELEDGVGSAEQAFLREQASISRSTGQMDNVVSQAQETLGALVLQRSTFGGINSKLSN
VSSRLPTVNHIVNAIKRKKSMDATILSLVASMCTFLIFIYWLTK
NT seq 675 nt   +upstreamnt  +downstreamnt
atggatttgcctagctcatgggacgctttacgcaaacaggcaaggaaactcgaagctcag
ttggatgagcagatgaattcataccgtaaactagtttctgcaaaggcttctactaaagta
gctactgcagtaaatgatcttgaatctgggttagaccaactgctaaagcagctccaacaa
gtgaattcacagatgcaagcttgggtgtcatctggaggatcagaaatggtttctcatacc
ttgaccaggcatcaagaaattcttcaagatcttactcaggagtttcatcgtcttcgttcc
agcctcagagctaagcaacaacatgcttcactccttgaggattttagggagtttgatcga
gctagactagagttggaagatggtgtaggttctgcagagcaagcttttcttagagagcag
gcatccattagccgaagtacaggacagatggataatgtggtttcacaagctcaagaaact
cttggtgcacttgttcttcaacgttcaacttttgggggaatcaattcaaagctcagcaat
gttagcagccggcttccaacggtaaatcacattgtcaatgcaataaagaggaagaagtca
atggatgccacaatactttccctggttgcatcaatgtgcacttttctcatctttatttat
tggttgaccaagtaa

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