Manihot esculenta (cassava): 110612816
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Entry
110612816 CDS
T05761
Name
(RefSeq) AP-2 complex subunit alpha-1 isoform X1
KO
K11824
AP-2 complex subunit alpha
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110612816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110612816
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mesc04147
]
110612816
Membrane trafficking [BR:
mesc04131
]
Endocytosis
Clathrin-mediated endocytosis
AP-2 complex
110612816
Exosome [BR:
mesc04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
110612816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Alpha_adaptin_C
Alpha_adaptinC2
Cnd1
HEAT_2
RRN3
SPT2
DUF5986
Motif
Other DBs
NCBI-GeneID:
110612816
NCBI-ProteinID:
XP_021609321
LinkDB
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Position
4:complement(1358069..1382847)
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AA seq
1020 aa
AA seq
DB search
MALSGMRGLSVFISDVRNCPNKEQERLRVDKELGNIRTRFKNEKGLTAYEKKKYVWKMLY
IYMLGYDVDFGHMEAVSLISAPKYPEKQVGYIVTSCLLNENHDFLRLAINTVRNDIIGRN
ETFQCMALTMVGNIGGREFAESLAADVQKLIISSSYRPLVRKKAALCLLRLYRKNPDVVN
IDGWADRMAQLLDERDLGVLTASTSLLVALVSNNHEAYWSCLPKCVRLLERLARNQDIPQ
EYTYYGIPSPWLQVKTMRALQYFPSIEDPNTRRSLFEVLQRILMGTDVVKNVNKNNAAHA
VLFEALALVMHLDAEKEMMSQCVALLGKFIAVREPNIRYLGLENMTRMLMVADVQDIIKR
HQAQITTSLKDPDISIRRRALDLLYGMCDVSNAKDIVEELLQYLSTADFAIREELSLKAA
ILAEKFAPDLSWYVDVILQLIDKAGEFVSDDVWFRVVQFVTNNEDLQPYAAAKAREYLDK
PAIHETMVKVSAYLLGEFSHLLARRPGCSPKEIFNIIHEKLPTVSTSTIPILLSTYAKIL
MHTQPPDPELQNQIWAIFNKYESCIDAEIQQRAVEYFALSTKGAALMDILAEMPKFPERQ
SALIKKAEDAEIDTAEQSAIKVRAQQQTSNALVVTDLRPANGLPPSVPAVGPLALVKVPS
TSGNAEHNSVDQALTQSNGTLTKVDAQPPSDLLGDLLGPLAIEGPPGAAIQPEHKAVSEV
EGVPSAVDGAAIVLVGEQTNSVQPIGNINERFYALCLKDSGVLYEDPCIQIGIKAEWQAH
HGRLVLFLGNKNTSALDSVQALILPPAHLKMELSLVPETIPPRAQVQCPLEVLNLHPSRD
VAVLDFSYKFGTNMVNVKLRLPAVLNKFLQPITVSAEEFFPQWRSLSGPPLKLQEVVRGV
RPLLLMEMANLFNSFRLMICPGLDPNPNNLVASTTFFSESTRAMLCLIRIETDPADRTQL
RMTVASGDPTLTFELKEFIKEQLVSIPTAPRVPTTAPPVARPTSPVMALTDPGAMLAGLL
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atggctctttcaggcatgagaggtctctctgtgtttattagcgacgttcgcaattgccca
aacaaagagcaggagaggcttcgcgttgataaagagcttggcaacatccgtactcgtttc
aaaaatgaaaagggtttgactgcttatgaaaagaagaaatatgtttggaaaatgctttat
atttatatgctgggttatgatgtggattttggtcacatggaagctgtttccttaatatct
gcaccaaaatacccagaaaagcaggttggctacatagtgacatcatgtttgctcaatgag
aaccatgattttctgagattagcaataaatactgtgcgcaatgacattattggtcgaaat
gaaacttttcagtgcatggcattgactatggttgggaatattggtgggagagaatttgct
gaatctttagcagcagatgttcaaaagttgattatttctagtagctacagacctcttgtg
aggaaaaaagctgcattatgtctgctgcgcttgtataggaaaaaccctgatgttgtcaac
atagatggctgggcagatcggatggctcaactgttagatgaacgtgatcttggtgtgttg
acagcttctacgagccttcttgttgctttagtatcaaataaccatgaagcatactggagt
tgtctaccaaagtgtgtcaggttattggagcgacttgctaggaatcaagatatcccacaa
gaatacacttattatggaatcccgtctccttggcttcaggttaaaacaatgagggctctt
cagtattttccaagtattgaagatcctaatactagaagatcattgtttgaggtcttgcag
cggatattgatgggaactgatgttgtaaaaaatgtaaataagaacaatgcagcacatgct
gttctctttgaagcccttgctcttgtcatgcatctcgatgctgaaaaggagatgatgtct
caatgtgttgctcttcttggaaaatttattgctgtgcgtgaaccaaatatccgatatctt
ggtttggagaatatgactcggatgttgatggttgcagatgtgcaagatattattaaaaga
caccaggctcagatcaccacctcgctgaaagatcctgatatcagcattcgtcggcgtgct
cttgatttactctatggtatgtgtgatgtttcaaatgcaaaggacatagtggaagaactg
ttgcagtatctaagcacagcagattttgcaatacgagaagaattgtctcttaaagctgct
attcttgcagagaagtttgccccagacttgtcttggtatgtggatgtgatcttacagttg
attgacaaggcaggagagtttgttagtgatgatgtatggtttcgtgttgtgcagtttgtt
acaaacaatgaagatctacagccttatgcagcagcaaaagccagagagtatcttgacaag
cctgctatacacgagacaatggttaaggtcagtgcttatctccttggagagttcagccac
cttctggctaggcgacctgggtgtagtccaaaggaaatatttaacataatacatgagaag
cttcctactgtatcaacatctaccataccaattcttctttcaacatatgctaagatctta
atgcacactcaacctcctgatccagaattgcaaaaccaaatctgggcaatatttaacaaa
tatgagagttgcattgatgctgaaatacaacagcgtgcagtagagtattttgcattaagt
acaaaaggtgcagctctaatggacatattggctgaaatgcctaaatttccagagcgtcag
tctgcattgattaaaaaagctgaagatgctgaaattgatactgcagagcaaagtgctatt
aaggtgcgggcccagcaacaaacttccaatgctttagttgtgactgacctacgccctgct
aatgggctaccaccaagtgttccagccgttggccctcttgcgcttgtcaaggttcccagc
acaagtggaaatgcagaacataattcagtggaccaagcactgacccagtcaaatggaact
ttgactaaggtagatgctcaacctccctcagatcttcttggtgatcttttgggaccattg
gctattgaaggtcctcctggagctgccattcaacctgagcataaagcagtctctgaagtc
gaaggtgtgccaagtgcagttgacggtgcagctattgtactagttggagaacagacaaat
tctgttcagcctataggaaatatcaatgaaagattttatgctttatgcttgaaagatagt
ggagtcctatacgaggatccatgcattcagattggtatcaaagcagagtggcaggcacat
catgggcgtcttgttcttttcctgggaaacaaaaatacttctgcgcttgattctgttcaa
gccctcatattgcctcctgcccatctcaaaatggagctttcattagtacctgaaactatt
cctccacgggcacaggtacaatgtccacttgaagtcttgaatcttcacccaagcagagat
gttgctgttcttgacttctcctacaagtttggtaccaacatggttaatgtgaagcttcgc
cttccagcggttcttaacaaatttcttcagcctataacagtgtctgcagaagagttcttt
cctcagtggagatcgctttcagggccacctctgaagcttcaagaagtcgtcagaggtgta
agaccactgctccttatggaaatggcaaacctatttaacagtttccgattgatgatttgt
ccagggcttgatccaaatcctaataacctggttgcaagtacaaccttcttctcagagagt
acaagggcaatgctttgtttgataagaattgaaactgatccagcagatagaacacagttg
cgaatgacagttgcctcaggagaccctacgctaacgttcgagctgaaggagttcatcaag
gaacagttggttagcattcctacagctccacgtgtacctacaacagcacctccggtagcg
cgaccaactagtcctgtgatggctttgacggatcccggggccatgttggctggtttgctg
taa
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