KEGG   Manihot esculenta (cassava): 110612855
Entry
110612855         CDS       T05761                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc03030  DNA replication
mesc03410  Base excision repair
mesc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    110612855
   03410 Base excision repair
    110612855
   03420 Nucleotide excision repair
    110612855
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mesc03032]
    110612855
   03400 DNA repair and recombination proteins [BR:mesc03400]
    110612855
Enzymes [BR:mesc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     110612855
DNA replication proteins [BR:mesc03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    110612855
DNA repair and recombination proteins [BR:mesc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      110612855
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf_DPOE_2 DNA_pol_B zf-DPOE DNA_pol_B_exo2 RNase_H_2 Cin1_N
Other DBs
NCBI-GeneID: 110612855
NCBI-ProteinID: XP_021609373
LinkDB
Position
4:complement(837398..864637)
AA seq 2222 aa
MNGDARRRDLRDFGRSSKKQKLIRNSEEELDLKFGFDLFTEGDKRLGWLLTFASSSWEDQ
ETRKVHSCVDLYFVSQDGSTFKSKFKFRPYFYAATKDKMEMDVEAYLRRRYESQIADIEI
VEKEDLDLKNHLSGLRKLYLKISFSTVQQLMDVKKDLLHVVARNQEKFDTAEAYEALLTG
KREQRPQDLLDCIVDLREYDVPYHVRFAIDNDIRCGQWYDVTVSNRGVTLEKRTDLLQRA
EVRVCAFDIETTKLPLKFPDADYDLIMMISYMVDGQGYLIINRECVGEDIEDLEYTPKPE
FEGCFKVTNVQSEVELLRRWFVHMQEVKPGIYVTYNGDYFDWPFLESRAAYHGLKMSDEV
GFSCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVR
FAKENPQMMASYSVSDAVATYFLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLM
VQSYKANVICPNKHQSDPEKFYKNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAY
DQLIGNLDRDLQYAIRVEGKMDLDSVSNYDEIKNAIMEKLVRLRDEPIREECPLIYHLDV
AAMYPNIILTNRLQPPSIVTEEICTACDFNRPDKTCLRKLEWVWRGEIFMAKKSDYYHLK
KQIESEFVDGTDGQLSKSFLDLSKVDQQSKLKERLKKYCQKAYKRVLDKPVTELREAGIC
MRENPFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLA
HKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIWCV
LPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNEQYQTLVDPVNKTYATHSECS
IEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAE
LFDKFLHGSTLEECYSAVAAVANRWLDLLDNQGKDIADSELLDYISESSTMSKSLVDYGQ
QKSCAVTTARRLADFLGDTMVKDKGLRCQYIVACEPRGTPVSERAVPVAIFETDAEIMKF
YLRKWCKTSLDVGIRSIIDWSYYKQRLSSAIQKIITIPAAMQKVANPVPRVLHPDWLHKK
VREKEDKYRQRKLVDIFSLSNGDESSRRTSDSADHIMNKENVEDLEDFQNKSSSKNGPRP
IVRLYEMNNGKCLQNATGRMDSSQQQINNRESIELLQQNASSTESIDRNVDYQGWLELKK
RKWKDVLDRRKRQRLGSLRNSNRANGASEPLGSLINNKKAQHRTGVGSYFATHEISLTRC
HWQIIQLLPSSHCGQFFAWVVVEGIMVKIPITVPRVFYLNSKAPMTERFPGRRVSKTLPH
GRPSYNLVEVSVDEDKFRKESKKLAALLSDPEVEGIYESKVPLEFSAILQIGCVCKVDKK
ATKRSAQDGWSLSELHTKTTTECTYLEQSISFFYLYHSISEGRAIFVMYLPLLRSLSVVV
VNPYQNKDLSPSFLERQFREASHALSIEPPPPRNGVVFKVEYVGHVKDAERTLQGRISEL
REKHHGPMLAVIECPNIHLMKSGIPALDNFPCVSIPSNIRDSQYQVLGWQQAAAKIGMQR
SAASSQWLNERISLSRYAHVPLGNFELDWLIFTADVFFSRALHDQQQLLWISDDGVPDLG
GINDESTCFVDEVHQPVLTYPGAYRKVSVELKIHHLAVNALLKSNQVNEMEGGALLGFEQ
DMNSSSHTYDEQYGFDEATLSAPALRALKQLIQRCLADAVSSGNVFADALLQHLYRWLCS
PQSKLHDPALHRILHKVMQKVFALLLAEFRKLGATIIFANFSKVIIDTGKLSLSAAKAYC
DSLLKTLQSRELFEWIELEPLQFWYSLLFMDQYNYGGIPARADDSSQSESQGEYSQREAS
QVDIVSSWNIAEYLPKKIQDHFVLIVSEFMFIPWDYAQKQAANRASLQNVSSCTPSITIA
AAETFESHLVEYLRGQISTYFTDKLLGIVRDTVLHMKGINKFENDQQISSGFPQLVDNIN
RGDPALEFIKHACAVLALDHNVQHEVLVMRKNLLKYVRVREFAPEAEFHNPCPSFVLPNV
ICSYCNDCRDLDLCRDTALLAQEWRCAVQQCGQPYDREVMENSLLQIVRQRERLYHLQDL
VCIRCNQVKAAHLAEQCACAGSYRCKEDLSEFRSKMQIFLNVAIHQKFKLLQECTSWILE
IH
NT seq 6669 nt   +upstreamnt  +downstreamnt
atgaacggcgatgcccggaggcgcgatctccgggatttcggccggagctcgaagaagcag
aagctgatacgcaactccgaagaggagcttgatttgaagttcggattcgatctctttacc
gagggagacaaacgcctcggttggcttctcacctttgcttcttcatcttgggaggatcaa
gaaacacgcaaagttcacagttgtgttgatctctactttgtctctcaggatggctcgact
ttcaagtcgaagttcaaatttcgtccttatttctatgccgccaccaaggataaaatggaa
atggatgttgaggcctatttgaggcgacgctacgaaagtcaaattgctgatattgagatt
gtggagaaggaagacctagatcttaaaaaccatttgtctggtttgcgcaaactatattta
aaaatatctttttcaactgtccaacaactaatggatgtgaagaaagatctattgcatgtt
gttgcaagaaaccaggaaaagtttgacactgctgaagcatatgaggccctattaacagga
aaaagagaacaaaggcctcaagatcttctagattgtatagttgatctccgggagtatgat
gttccataccatgtccgttttgcaattgacaatgacatccgatgtgggcaatggtacgat
gtcactgtatccaatagaggcgttacacttgaaaagaggactgatcttttgcaacgtgct
gaagttcgcgtttgtgcatttgatattgaaactaccaagcttcctttgaagtttccagat
gctgattatgatttaataatgatgatatcatacatggttgatggacaagggtacttgatt
attaacagagagtgtgtaggggaagatatagaggatttagagtataccccaaaaccagaa
tttgaagggtgcttcaaagtgaccaatgtgcaaagcgaggtagaacttcttcgacggtgg
tttgtgcacatgcaagaggtgaaacctggtatttatgttacatacaatggtgattatttt
gactggccatttctggaaagcagagcagcttatcatgggttgaagatgagtgatgaggtt
ggcttttcatgtgacaagaatcaaggggaatgtcgtgctaaatttgcttgccatttggat
tgttttgcttgggtcaaacgtgatagttatttgcctcaagggagccaaggtcttaaggct
gtcacaaaggcaaaattgggttatgatccactggaggtgaatccagaagacatggttcgc
tttgctaaagaaaatccccagatgatggcctcctattcagtttctgatgctgttgcaact
tattttttgtatatgacatatgttcatccattcattttttctcttgcaactataattcct
atgtcacctgacgaggttttacgcaaaggcagtggaacactttgtgaaatgcttctcatg
gtgcagtcgtacaaggcaaatgttatctgccctaacaaacaccaatcggaccctgagaag
ttctataagaatcaccttcttgagagcgagacatacattggtggccatgtggagtgcctt
gaaagtggtgttttcagatctgatctacctactagttttaaacttgatccatcagcatat
gatcaattgattggaaaccttgatcgagatcttcaatatgctataagagtagagggaaag
atggacttggattcagtctccaattatgatgaaataaagaatgctatcatggaaaagcta
gtgaggttgagagatgaacccatacgcgaggaatgccccctcatttatcatttagatgtg
gcagcaatgtacccaaacattattttgacaaacaggcttcagcctccctctatagttaca
gaagagatttgtactgcatgtgacttcaaccgtccagacaaaacttgtctacgaaagctt
gaatgggtttggcgaggagagatatttatggcaaagaaaagtgactattatcatttgaag
aagcaaattgagtctgaatttgttgatggtactgatggtcagttgtccaagtcttttctt
gacctctctaaggtagaccaacaatcaaagctcaaagagcgtctaaagaaatactgtcag
aaggcatataaacgtgtacttgataaacctgtcactgaacttcgagaagcagggatctgc
atgcgtgaaaatccattttatgttgacactgttcgcagctttcgagatagaaggtatgaa
tataaaggactgaataaggtttggaaggggaagttgtcagaagccaaggctagtggaaat
tccattaagatccaggaagcacaggacatggttgtgctttatgattcattgcaacttgca
cacaaatgtatacttaattccttttatggatatgtcatgcgaaagggtgcaagatggtac
tcaatggaaatggctggtgtagttacatatacaggagcaaaaataattcagaatgctcgc
ttgctcgttgaaaaaattggaaaaccacttgaattggacacagatggtatatggtgtgtg
ctccctggatcttttccagagaactttacctttaaaacaaaggacctaaagaaaaaatta
acaatctcatatccctgtgttatgcttaacgttgatgttgcaaggaacaatacaaatgag
caataccagacactcgttgatcctgtaaataaaacatatgcaactcatagtgaatgctca
attgaatttgaagttgatggcccatacaaggcaatgattctcccagcttctaaggaagaa
ggaatcttaattaagaaacgttatgctgtcttcaatgatgatggaaccttggccgagctt
aaaggttttgaaatcaagcgtagaggtgagctgaagttgatcaaagttttccaggctgag
ctttttgacaagttcctgcatggatcaaccttagaggaatgttattcagctgtcgctgct
gtagctaaccgctggcttgatcttcttgataatcaaggaaaggatattgctgacagtgag
ttgcttgattatatatctgaatcaagcacaatgagcaagtctctggtagactatggtcaa
caaaagtcatgtgcagtgaccactgcaaggcgtcttgcagattttcttggtgatacaatg
gttaaagataaagggttgcgttgtcaatatatcgttgcatgtgaaccgagggggacgcct
gtgagtgaacgtgctgttcctgttgcaatatttgaaactgatgctgaaataatgaagttc
tatttacggaagtggtgcaagacttcattggatgtcggcattagatccatcattgattgg
tcgtattacaagcaacgactaagttcagctattcagaagattattacaattcctgctgca
atgcagaaggttgcaaaccctgtccctagggttcttcatcctgattggttgcataagaag
gttcgtgaaaaggaggataaatatcgtcaaagaaaattggttgatatcttcagcttatcc
aatggggatgagtcatcaaggaggactagtgattctgctgatcatattatgaataaggag
aatgttgaggatttggaagacttccaaaataaaagcagttctaaaaatgggcctagacca
atcgttcgtctttatgaaatgaataatggaaaatgtttgcaaaatgcaactgggagaatg
gattcctcacaacagcaaattaataatagagaaagcatagaattgttgcaacaaaatgca
tcctccactgaaagtattgacagaaatgtagattatcaagggtggcttgaattaaagaaa
agaaagtggaaagatgttctagacaggaggaagaggcaaaggttgggcagtttgaggaac
tcaaatcgtgctaatggtgcttctgagcctctaggtagcctgataaataataaaaaagct
cagcatagaacaggtgttggttcatatttcgcaacacatgaaatttcactaacacgatgc
cactggcagataattcagctgcttccaagttcacattgcggacaattttttgcatgggtt
gttgttgaaggaatcatggttaagattcctataacagttcccagagtattttacctcaac
tctaaagcacctatgacggaaagatttcctggaaggcgtgtgagcaagactcttcctcat
ggaaggcctagctataacttagttgaggtttctgtagatgaagataaattcagaaaagaa
agcaaaaaacttgcagctcttctttcagatccagaagttgagggcatctatgaatcaaag
gttccattagagtttagtgccatactccagattggttgtgtctgtaaagtggataaaaaa
gctaccaaacggagtgcccaggatggctggagtctgagtgaactgcacacaaagacaaca
acagaatgtacttacttggagcaatcaatctccttcttttacctatatcatagcatctct
gaaggacgtgcgatatttgttatgtacctgccattgttgaggtctttatctgttgtggtg
gtcaatccttatcaaaacaaggatttatctccatcttttcttgaaagacaatttcgggaa
gcctcccatgcattgtccattgaaccacctcctcccaggaacggtgttgttttcaaggta
gaatatgttggacatgtcaaggatgctgagaggactttacagggaagaataagtgaactc
agagaaaaacaccatggacctatgcttgctgtcattgaatgcccaaatattcatttgatg
aagtcaggcataccagcccttgataatttcccttgtgtgagcataccatccaatattcgt
gatagtcagtatcaggttcttgggtggcaacaagcagctgcaaaaattggaatgcaacgt
tctgctgcatcatctcagtggttgaatgaaagaatttctctctcaagatatgcccatgta
cctttgggaaattttgaacttgactggcttatatttacagcagatgtcttcttctcgaga
gcactacatgatcagcaacagttactttggatatctgatgatggtgttcctgatctggga
gggattaatgatgaatctacatgttttgtagatgaggtccatcaacctgttcttacatac
cctggagcttatagaaaagtatctgtggagttaaagattcatcaccttgctgtaaatgct
ctgctgaaaagcaaccaagtgaatgaaatggaaggaggtgcattgttaggatttgagcag
gacatgaattctagttcacatacttatgatgaacaatatggcttcgatgaggctacattg
tccgcacctgcattacgtgccttgaaacagctgatccagagatgccttgcagatgcagtt
tcatctggaaatgtctttgctgatgcattgttgcaacatctttatcgttggctttgcagt
cctcaatcaaagcttcatgacccagctcttcatcgcatactccacaaggtcatgcaaaag
gtgtttgctttgttgttggctgaatttcgcaagttaggtgccacaattatatttgcaaat
ttttcaaaagttatcatagatactggaaagctcagtctatctgcagcaaaagcttactgt
gatagcttgctcaaaacattgcaatctagagagctgtttgagtggattgagcttgagcca
ctacagttctggtattccttgcttttcatggatcagtataactatggtggaattccagcc
agagctgatgacagttcgcaaagtgaatcacaaggggaatattcccaaagagaagcatct
caagtggatattgtatcaagttggaatattgctgaatacttgcccaagaaaattcaagat
cattttgttttaattgtctcagaatttatgtttattccctgggattatgctcaaaagcaa
gctgcaaacagagcatctttgcagaatgtcagctcatgtactccatcaatcaccattgca
gctgctgagacatttgaatcacatttggtggagtatcttagagggcagatcagcacgtac
ttcactgacaaactgcttgggattgttcgggatactgttcttcatatgaaggggataaac
aagtttgagaatgaccaacaaatttcctctggtttcccacaacttgtggataacattaat
agaggggatcctgcattggaatttattaagcatgcgtgtgctgttctggcccttgaccac
aatgtgcagcatgaagttctggtgatgagaaaaaatctgttaaaatatgtgcgagtccgg
gagttcgctcctgaagctgagtttcacaatccctgcccttcctttgttttgccaaatgta
atctgcagctactgcaatgactgcagagatctggacctgtgtcgggacacagctttactg
gctcaggagtggcgttgtgctgtccaacagtgtggccagccttatgaccgagaggtgatg
gagaattctcttcttcaaattgtacgacagagggaacgtctctatcatttacaggatctg
gtgtgcattagatgcaatcaggtcaaagctgcacatttagcagaacagtgtgcctgtgct
ggatcatatagatgcaaggaggatttgtctgaattccgcagcaaaatgcagatattctta
aacgtagccattcaccagaagtttaaactccttcaagagtgtacttcatggattttagaa
attcattag

DBGET integrated database retrieval system