KEGG   Manihot esculenta (cassava): 110612879
Entry
110612879         CDS       T05761                                 
Name
(RefSeq) DNA repair protein RAD5A isoform X1
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
mesc  Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mesc03400]
    110612879
DNA repair and recombination proteins [BR:mesc03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    110612879
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-C3HC4_3 zf-C3HC4 zf-RING_UBOX zf-C3HC4_2 zf-RING_2 DEAD zf-C3HC4_4 RING_XB3-XBAT31 Prok-RING_4 ResIII zf-RING_5 zf-RING_4 zf-ANAPC11 SWI2_SNF2
Other DBs
NCBI-GeneID: 110612879
NCBI-ProteinID: XP_021609406
LinkDB
Position
4:complement(1307230..1318531)
AA seq 1035 aa
MGNKVTDELLSTVRSIVGCDFSDMDIIRALHLANYDPTAAINIIFDTPNFNSKFNPQIPK
TPNSSTKCKPKPTPDKPTVVDKENEDNLGVSCSGITRGEVDVNGENLCPSGYVGSEWWYV
GGGVVAGLSTCKGRKVKAGDEVIFTFPTKSSNSSSPSPRKVFGKGRLAAASCSEIVRFST
RDGGEVGRIPNEWARCLLPLVRDKKVRVEGCCRSAPDVLGIMDTILLSISVYIDSTMFLK
HKKTSLKAASHSTEETIVHPLPNLFRLLGLTPFKKAEFTPADLYTKKRPLNSKDGSGIPV
SLLHVNNSKNQSQTGNQVENEESLSDADLDNIVGVGNNSELEEMDPPSTLQCELRPYQKQ
ALYWMIQLEKGNYADEGATTLHPCWEAYHLADKRNLVVYLNTFSGDATIEFPSTLQMARG
GILADAMGLGKTIMTISLLLAQSERDGSSSNGSLSQLSNEDGEIGDTSDLPNPLKKATKF
SGFDKLMKQKKILVHGGNLIICPMTLLGQWKAEIETHTQPGSLSIYIHYGQSRTKDAKLL
AQNDVVITTYGVLASEFSAENAEENGGLYSIQWYRVILDEAHTIKSSRSQISIAAAALVA
ECRWCLTGTPIQNNLEDIYSLLRFLKVEPWESWAWWNKLVQKPFEEGDERGLKLVQSILK
PIMLRRTKSSTDQEGRPILVLPPAEIQVVYCELTEAERDFYEALFKRSKVKFDQFVEQGR
VLHNYASILELLLRLRQCCDHPFLVMSRGDTQEYSDLNKLAKRFLKGGQDAQDTEGRNVP
SRAYIQEVVEELRKGEQGECPICLEAFEDAVLTPCAHRLCRECLLASWKNPNSGLCPVCR
KTINRQELITAPTDSRFQIDIEKSWVESSKVNVLLQELENLRLSGSKSILFSQWTAFLDL
LQIPLSRSNIPFVRLDGTLSQQQRERVIKQFSEDDTILVLLMSLKAGGVGINLTAASNAF
VMDPWWNPAVEEQAVMRIHRIGQTKQVKIKRFIVKGTVEERMEAVQARKQRMISGALTDE
EVRTARIEELKMLFT
NT seq 3108 nt   +upstreamnt  +downstreamnt
atgggaaacaaagtcactgacgagctgctctccactgttcggtctatcgttggctgtgac
ttctccgatatggacatcatcagagctctccaccttgcaaactatgaccctaccgcagct
atcaacatcatatttgacacccctaatttcaattctaaatttaatccccaaattcctaaa
accccaaattcaagcacaaagtgtaaacctaaacctacccctgacaagccgacagtggta
gataaggagaatgaggataatttaggtgtttcttgcagcggaattactaggggtgaggtt
gatgttaatggtgagaatttgtgtccttcgggttacgttggtagtgagtggtggtatgtc
ggtggcggagtagtggcggggctgtcaacgtgtaaggggaggaaagtgaaggctggtgat
gaagttatattcacatttccaacaaagagtagtaattcaagttctccttctcccaggaag
gtttttgggaaggggaggctggcagctgcatcttgttcggagatagtgaggttttccact
agagatggtggagaagttggtcgaatacctaatgagtgggctcgatgtctgttgcctctt
gtgagagataagaaggttagagttgaaggatgttgtagatctgctcctgatgtactgggg
ataatggataccattctgttatcaataagtgtatacattgacagcactatgttcctcaag
cacaagaagacctcacttaaggcagccagccattctaccgaggaaacaattgttcatcct
cttccaaatttattccgtttgcttggattgaccccttttaagaaggcagaattcacacct
gctgatttgtacacaaagaagcgacctttgaactcaaaggatgggtctggtattcctgtg
tcactgttacatgtcaacaactcaaagaatcaatcacaaactggaaatcaagttgaaaat
gaggagtccctttctgatgctgatctcgacaatattgttggtgttgggaataattctgag
ttagaggaaatggatcctcctagtacacttcagtgtgaacttcgaccctaccaaaagcag
gccttgtattggatgattcagttagagaagggaaactatgcagatgagggagctacaact
cttcatccatgttgggaggcttatcatctagctgacaagaggaatcttgttgtctatttg
aatacgttttcaggtgatgctacaatagaatttccaagcacacttcaaatggccagggga
ggaattctggcagatgctatgggactcgggaagaccatcatgaccatatcccttctgctt
gctcaatcagaaagggatgggtcatcaagtaatggatctttgagtcagctttcaaatgaa
gatggtgagattggtgatacttcagatttgccaaatcctctgaaaaaggctacaaaattt
tctggctttgataagttgatgaagcaaaagaaaattcttgtacatggtggcaatctgatt
atatgccctatgactcttttgggccagtggaaggcagagatagaaactcacacacaacct
ggttctttatctatatatattcactatggacaaagtagaacaaaggatgcaaagcttctg
gcccagaatgatgttgtaataactacatatggagtattagcatcagagttttcagcagag
aatgctgaagagaatgggggactctattcaattcagtggtatagagtgattcttgatgag
gcacataccataaaatcttcaagaagtcaaatttccattgctgctgctgctctagttgct
gagtgtcgctggtgtcttactggcactcctatccaaaataacctggaggacatctatagc
ctgcttcggtttttgaaggtggagccttgggaaagttgggcatggtggaataaacttgtc
caaaaaccatttgaggagggtgatgagagaggactgaagttggtacaatccatcttaaag
ccgattatgttaaggagaacaaagtctagcacagatcaagaaggcaggccaattctagtt
ctccctcctgcagagattcaggtggtatattgtgaactgacagaagcagaacgagatttc
tacgaggctttgtttaaaagatccaaggtgaagtttgatcagtttgtagagcaaggacga
gttcttcataattatgcttctatcttggagttacttttacgccttcgccaatgttgtgat
catccatttcttgtgatgagtcgaggtgatacacaagaatattctgacctaaacaagcta
gcaaaacgcttccttaaaggtggccaggatgcccaagatacagaaggcagaaatgtgcct
tcacgggcatacattcaagaggttgtggaagagttgcgcaagggggaacaaggagaatgt
ccaatatgtcttgaagcatttgaagatgcagtgttgactccatgtgctcatcgcttatgt
agagaatgtctattggcaagctggaaaaatcctaattctggtttatgtcctgtttgtagg
aaaaccatcaatagacaagagctgattacagctccaactgacagtcggtttcagattgat
attgaaaaaagttgggtggaatcatccaaagttaatgtccttttgcaagaacttgaaaat
cttcgcttatcaggatctaagagtattctcttcagccagtggactgcctttctggatctc
ttacaaattcctctttctaggagtaatattccatttgttcgtttggatgggactctaagc
cagcagcagcgtgaaagagttataaaacagttctcagaagatgacactatcctggtatta
ttgatgtcattgaaggctggaggtgttgggataaatctgacagcagcttcaaatgccttt
gtcatggatccttggtggaatccagctgtagaggaacaagctgtgatgcggattcatcgc
attggacaaacaaaacaagtgaagatcaagcggttcattgtaaagggaactgttgaggaa
agaatggaggcagtgcaagcacgcaagcagcggatgatttctggtgccttgactgatgaa
gaagttcgaactgcgcgaattgaagagctgaaaatgctttttacatag

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