Manihot esculenta (cassava): 110612944
Help
Entry
110612944 CDS
T05761
Name
(RefSeq) exosome complex component RRP41-like isoform X1
KO
K12587
exosome complex component MTR3
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110612944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110612944
Messenger RNA biogenesis [BR:
mesc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
110612944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
110612944
NCBI-ProteinID:
XP_021609499
LinkDB
All DBs
Position
4:2233478..2237748
Genome browser
AA seq
256 aa
AA seq
DB search
MASKPGSAPTTYTPTPTRKSRPPIFKDSDVDWVRPDGRGFHQCRPAFFRTGAVNAAAGSA
YAEFGNTKVIVSVFGPRESKKAMMYSDVGRLNCNVSYTTFATPVRGQGSDHKEFSSMLHK
ALEGAIMLETFPKTTVDVFALVLESGGSDIPVVISCASLALADAGIMMYDLVAGVSVSCL
GTNLVIDPILEEESCQDGNLMMTCMPSRYEVTQLTVTGEWSSAKMNEAMQLCLDACSKLA
TIMRSCLKEAASATQD
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggcctccaaacccggttcagctccgaccacgtacactccgactcctactcgtaaatcc
cgtccacccattttcaaagactccgatgtcgattgggtccgtcctgacggccgcggtttc
caccagtgccggcctgcctttttcaggactggtgctgtcaatgctgctgctggatcagct
tatgccgaattcggtaatacaaaggtcattgtatctgtatttgggcccagagagagcaag
aaagcgatgatgtatagtgacgttggccggctgaattgcaatgtgagctatacaactttt
gccaccccagtccgagggcagggatcagaccataaagaattttcctcaatgcttcataaa
gctttggaaggtgcaataatgttggaaacttttcctaagacaactgtagatgtttttgca
ttggtgttggaatctggtggcagtgatattcctgttgtaatatcttgtgcaagccttgcc
ttggctgatgcagggattatgatgtatgacctcgttgctggagtttcagtgtcttgtctt
ggcacaaacctcgtcattgatccaattttggaagaggaaagctgtcaagatggaaaccta
atgatgacctgtatgccttctcgttatgaggtcactcagctgactgttacaggggaatgg
tcgtctgcaaaaatgaacgaggcaatgcagctttgccttgatgcgtgttcaaagcttgcg
acgataatgaggtcatgtttgaaagaggctgcttctgctacacaagattag
DBGET
integrated database retrieval system
