Manihot esculenta (cassava): 110612993
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Entry
110612993 CDS
T05761
Name
(RefSeq) programmed cell death 6-interacting protein
KO
K15559
regulator of Ty1 transposition protein 103
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesc03021
]
110612993
Transcription machinery [BR:
mesc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
110612993
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Gene cluster
GFIT
Motif
Pfam:
CID
Allexi_40kDa
Mod_r
CREPT
P4Ha_N
Motif
Other DBs
NCBI-GeneID:
110612993
NCBI-ProteinID:
XP_021609575
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Position
4:29298759..29309752
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AA seq
523 aa
AA seq
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MLGEMGSSFNPQILVEKLTKLNHSQASIETLSHWCIFHMNKAKQVVETWDRQFHCSPREQ
RLAFLYLANDILQNSRRKGSEFVGEFWKVLPDALRDVIENGDEAGRNAALRLIGIWEDRK
VFGSRGQILKEELVGKHSDGSNRNGKSVGFKLKQPTGSTLDKIISGYQVVDASQVDEDVI
INKCRSAISSLEKAEKEIGVNINSGQFHATSFVEELQGQHTILRDSIEQLTAIESSRASL
VSHLRDALQEQEYKLEQIRSQLQAGQSQSEHASNVCQKLLRSGNMQLVGEQGSKEVGTSI
ASQNFRTGDREQSVPTMYTRQAPFPEKTGQIEEDPRKSAAAAVAAKLTASTSSAQMLSFV
LSSLASEGGIGNPIKESSGDYASGKRAKLENDQPYIPTQNPPQQPLPPFQHPESFQVATS
GQQLTSNDPPPPPSSPPPPPPLPPMQPYSIPQYMQTAGSINNVPYNYSMSQQQPPSLPGY
PGVGTQMTGIAPYTMPPSNSYPSYQGSDGTLYSQQSSMPISRQ
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgttgggagaaatggggagttcgtttaatcctcagattttagtggaaaagctcaccaag
ctcaaccattcacaagcaagcatagagactttatcacattggtgtatttttcatatgaat
aaagcgaagcaagttgttgaaacatgggacagacaatttcattgctctccacgtgagcag
aggttggcttttctatatcttgcaaatgacattttgcagaatagccgccgtaaaggttca
gagtttgttggtgaattttggaaggttcttccagatgcccttcgtgatgtaattgaaaat
ggggatgaggctggaagaaatgctgcgcttagactgattggcatatgggaagacagaaaa
gtttttggctcacgtgggcaaattctcaaggaagagcttgtgggaaagcactcagatggt
agtaatagaaatgggaagagcgtaggcttcaaactgaagcaacctactggaagcacattg
gacaagataatttcaggttatcaagttgttgatgccagccaggtggatgaagacgttata
ataaacaaatgtaggagtgctattagctcgcttgagaaggctgagaaggaaattggtgtc
aatattaattcaggacaattccatgcaacttcatttgtggaagagctgcaagggcagcac
actattttgagggatagcattgaacaactgacagccattgaatcatcaagggcaagtctt
gtgtctcacctgagagacgcccttcaggagcaggaatacaagctggaacagattcgcagt
caacttcaggctggacagtcccaatcagaacatgctagtaatgtctgccagaagttgctg
cgttccggtaatatgcagttagttggcgagcaaggttcaaaggaagttggcacttccatt
gcatctcaaaactttagaactggagatagggaacaatcagtgccaacgatgtacacacgg
caggcacctttccctgaaaaaactggtcaaatagaggaagatcccagaaagtctgctgct
gctgcagtggcagcaaaattgactgcgtcgacgtcctcagcccagatgctgtcttttgtc
ctctcttcacttgcatctgagggtggaattggcaatccaataaaagaatcatctggtgat
tatgcctctggcaagagagctaagctcgagaatgatcagccttacataccgacccagaat
cccccacagcaaccgcttcctcctttccaacatccggaatctttccaagtggcaacctct
gggcagcagttaacttcaaatgatccaccacctcccccatcatcacctccaccaccacct
ccgctaccacctatgcaaccttactcaattcctcagtacatgcagactgctggatcaata
aacaatgtgccatacaactacagcatgtcccagcagcaaccaccttccttgcctggctat
ccaggagttgggactcaaatgacaggtatcgctccgtatacaatgcccccatcaaattca
tacccaagttatcagggttcagacggtacgttgtatagccaacaatcatcgatgccaatt
tcccggcaatag
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