Manihot esculenta (cassava): 110613031
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Entry
110613031 CDS
T05761
Name
(RefSeq) uncharacterized protein LOC110613031
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110613031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mesc03036
]
110613031
Chromosome and associated proteins [BR:
mesc03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
110613031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
110613031
NCBI-ProteinID:
XP_021609627
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All DBs
Position
4:3353323..3359728
Genome browser
AA seq
1396 aa
AA seq
DB search
MAIEKNSFKGSRFDSECSPNSRETMSSDEDEVERRFSAAESDDDNDDFDDADSGAGSDDF
DLLELGETGAEFCQIGNLTCSVPFELYDLSGLEDILSVDVWNEVLTEEERFSLTKYLPDL
DQHTFMLTLKELFEGQNFHFGSPIKKLFELLKGGLCEPRVALYREGLGFFQKRQHYHLLR
KHHNNMVSNLCQIRDAWLSCTEYSIEEKLRVLNIMKGEKNLVSGKMEEDLESDSSEKYDL
DDGLWVKRVEDRKSALRLGRNSAYGAAPILDLATRMPSVDLEVPKYGKHNPKGILKLSAS
KTFPPKETMGRFPSAYQGLDANTRPYGFPVPISRHKVMGYDSGAANRLRDRMIINDGDDD
DDDVEDAMDGMNFRRVRNAAHSGLMDKPRGLKAGKKHDLLGSEELGTESFRGFPFSSKKD
SLAYGKNRNANQLSEVKGFAAKPPTIQTSHEFGKKAKRPEPIQQFGVGDHMKPRKSRTPQ
LTAKGNQIDLSEHGKTIWHGKHHGRISMDSSLKSDDHDMRSKKWKEGRESPDLSFKAYGA
SSPRVNDRILLSELRAKSSQEKIRANFIQNGRQDKGAKKLNRMYVKNEETESDSSEQFDD
DDDEDINPLMSSKSPYPSGIIDGSRSSLLKSGLDAKKRKFAKKDMQDNALAFDGMTDFSK
KVAGFSELGPIHEYSSKAKQKSKMRASSQFHNPGSKALENGPICGLGKATDDDDRKRSHK
IGKNGQLRESAERLHISSYPSYPSHRKQKRDVSKSDYIIEEEDDSLETRLLADENAVVRL
GKRGQGSEAYVPDPLDRSDASFQGFNLMSKKRKAKEESTNTDRRDEDGNMRSSLQQQIDD
SVSLKKKGKRKVDADTGTSAMEISEPPLTKMGIADMDLETKPQKKPYTPITPTVHTGFSF
SIIHLLSAVRLAMISPLPEDSLENVKSTGVQNGKVEGDTNGAVSHESPDVNKSDSVLQVN
VPSLTIQEIVNRVRSNPGDPCILETQEPLQDLVRGVLKIFSSKTAPLGAKGWKALVVYEK
STKSWSWIGPVSNTSTDHETIEEVTSPEYWGLPHKMLVKLVDSFANWLKSGQETLQQIGS
LPAPPMSMMQCNLDEKERFRDLRAQKSLNTISPSSEEVRAYFRKEEVLRYSIPDRAFSYT
AADGKKSIVAPLRRCGGKPTSKAREHFMLKHDRPPHVTILCLVRDAAARLPGSIGTRADV
CTLIRDSQYIVEEVSDAQVNQVVSGALDRLHYERDPCVQFDGERKLWVYLHRDREEEDFE
DDGTSSTKKWKRQKKDPADQPDQGAVTVAFHGNVDQSGFDMGSDLNVEPPGPDDDKRTDL
VYNDAKQRVQNNAEASHVSEQGSMHQGHPVAWDDALSSNPMRENKLLCQENSTNEDFDDE
TFGRERPVGLLSASLL
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atggcgattgagaagaacagcttcaaggggtctaggttcgattcagagtgttctcccaat
agtagggagaccatgtccagtgatgaggatgaggttgagcgtcgattctctgctgctgaa
tctgatgacgacaatgatgattttgatgatgcggattctggggcgggatctgatgacttc
gacttgttagaattgggggaaactggggctgagttttgtcaaattgggaatttaacttgt
agcgttccttttgaattgtatgatctttcaggtttggaggatatattgtctgtagatgtg
tggaatgaagttttaactgaggaggagaggtttagcctcaccaaatatctgcctgatttg
gatcagcacacctttatgctaaccctcaaagagctttttgagggtcagaatttccatttt
ggcagccctattaagaagctgtttgagctattgaaaggagggttatgtgagccaagggtt
gctctttatagggagggtttaggtttctttcagaagcggcagcattaccatctgttgagg
aagcatcacaataatatggtcagtaatttatgtcagataagggatgcttggcttagttgc
acggaatatagtattgaagagaagcttagggttttgaatattatgaagggtgaaaagaat
ttggtgtctgggaagatggaggaagatttggagagtgactcgtcagagaaatatgactta
gatgatggactatgggtcaaaagggttgaggacaggaaaagtgctctcagattgggtcgt
aattctgcatatggggctgctccgattttggatttggctacacggatgccttcagtggat
ttggaagtgccaaagtatggaaagcacaatccaaagggtatactgaagttgtctgcatca
aaaacttttcccccgaaggagacaatgggtcggtttccttctgcttatcaaggtttggat
gcaaatactaggccatatggttttccagttccaatttctcgtcataaggtgatggggtat
gactcaggggcagctaataggctaagggatcgaatgataattaatgatggtgatgatgat
gatgatgatgtggaagatgcaatggatgggatgaacttccgacgcgttcgaaatgcagca
catagtggtttgatggacaaacctaggggtttaaaagcaggaaagaagcatgacctcttg
ggaagtgaggaattaggcactgagagtttcagaggctttcctttctcttcaaagaaagat
tcacttgcctacgggaagaacaggaatgcaaatcagctgtcagaagtgaaggggtttgct
gctaagccacctaccattcagacttcccatgagtttggcaaaaaggccaagcgtcctgaa
cctatccagcaatttggtgttggagatcacatgaagccacggaaaagccgaacaccgcag
ttaactgcgaaaggtaatcagattgacttatcagagcatggaaaaaccatttggcatgga
aagcaccatgggcgcatctccatggattcatcactgaaatccgatgatcatgatatgaga
agtaagaagtggaaagaagggagggagtccccagatctcagttttaaagcttatggagct
tcctctccacgggtgaatgatagaattttgctttcagagttgagagcaaaatcatcacaa
gagaagatcagagcaaatttcatacagaatggaaggcaggataaaggagcaaaaaaattg
aacagaatgtatgtaaaaaatgaggaaacagaatcagactcatctgagcaatttgatgat
gatgacgatgaggatatcaatcctttgatgagcagcaagtctccttatcccagtggtatc
attgatggttctcggtcatccttgttaaaatctggcttagatgctaaaaagcgtaaattt
gctaagaaagatatgcaggataatgcactggcttttgatggaatgacagatttctccaaa
aaggtggctggctttagtgagctagggcccattcatgaatactcgtcaaaagcaaagcag
aagagcaagatgcgagccagcagtcaatttcataaccctggaagtaaagctttagaaaac
ggccctatttgtggcttgggtaaagctacagatgatgatgacaggaaaagaagtcacaag
ataggcaagaatggacagttgcgagaatctgctgaaaggttacatatatcctcataccct
tcctacccttctcatcgaaagcagaaaagggatgtcagtaaaagtgattacattattgaa
gaggaggatgattctcttgaaactcgtctattggcagatgaaaatgcagtagttagattg
ggaaagagaggacagggcagtgaagcatatgttcctgatccactagacagatctgatgct
tcatttcaagggttcaacttgatgtcaaagaaacggaaagcaaaggaggaatcaactaac
actgatagaagagatgaagatggtaatatgcggtcaagccttcagcagcaaattgatgac
tccgtttcattgaagaaaaagggaaaaaggaaagtggatgctgatacaggcacttcagct
atggaaatttctgagccacctcttacaaaaatgggaatagcagacatggatctagaaacc
aaaccacaaaaaaagccatatacaccaattacacctacagttcatacaggcttctcattt
tccattatacatcttctttcagcagttcgcctggcaatgatcagtcctcttccagaagat
tccttagagaatgtaaaatctaccggggtgcagaatggaaaagttgaaggtgacacaaat
ggtgctgtttctcatgagagtccagatgtaaataaatcagacagtgttctccaggtgaat
gtgccatctcttaccatacaggagattgttaaccgtgtgagatcaaaccctggggatcct
tgtattcttgagacgcaagagccacttcaagatctggtgagaggggtccttaagatattt
tcatcaaaaacagcacctctaggagcaaaaggttggaaggcactagtggtttatgaaaaa
tctacaaagagttggtcttggattggtccagtatccaatacttcaactgatcatgagact
attgaggaggttacttctcccgaatattggggccttcctcataaaatgcttgtcaagttg
gttgattcatttgctaattggctgaaaagtggtcaagagacccttcaacaaattggaagt
cttccagcaccacccatgtcaatgatgcagtgtaatcttgatgagaaagaaaggttcagg
gacctgagagctcagaagagtctcaacactattagcccaagttctgaagaagtgagggct
tatttccgcaaggaagaagttttaaggtattccattcctgaccgagccttctcatacaca
gctgctgatgggaaaaaatctattgtggctcctttgagaaggtgtgggggtaagccaact
tcaaaagcccgagaacatttcatgttgaagcatgatcggccacctcatgttacgattctt
tgtcttgtgagagatgcggctgccagattgcctggaagtattggcactagagcagatgtt
tgtaccttgataagagactctcagtatattgttgaagaagtatctgatgctcaagtgaac
caggttgtcagtggagccctggaccgtttacattatgaacgtgatccttgtgtacagttt
gatggggagaggaaattgtgggtttacttgcacagagatagagaagaagaagattttgaa
gatgatggtacttcatctacgaagaaatggaagagacagaaaaaggatccagctgaccaa
cctgatcaaggagcagtaactgtggcttttcatgggaatgtggatcagtctggatttgat
atgggctctgacctcaacgttgagccaccaggccccgatgatgataaaagaacagatctt
gtgtataatgatgcaaaacaaagggtacaaaataatgctgaggctagtcatgtgtcagag
caaggtagcatgcatcagggtcatccagtggcttgggatgatgcccttagttcaaatcca
atgagagagaacaaattattatgtcaagaaaattccacaaatgaagattttgatgatgag
acatttgggagagagaggccagttggactattaagtgcaagtttattatga
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