Manihot esculenta (cassava): 110613037
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Entry
110613037 CDS
T05761
Name
(RefSeq) probable ubiquitin-conjugating enzyme E2 23
KO
K10581
ubiquitin-conjugating enzyme E2 O [EC:
2.3.2.24
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110613037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110613037
Enzymes [BR:
mesc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.24 (E3-independent) E2 ubiquitin-conjugating enzyme
110613037
Ubiquitin system [BR:
mesc04121
]
Ubiquitin-conjugating enzymes (E2)
Ubiquitin-conjugating enzymes
110613037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tSH3-B_UBE2O
SH3-B_UBE2O
UQ_con
SH3-A_UBE2O
SH3-C_UBE2O
SR-25
Motif
Other DBs
NCBI-GeneID:
110613037
NCBI-ProteinID:
XP_021609635
LinkDB
All DBs
Position
4:27180909..27194096
Genome browser
AA seq
1156 aa
AA seq
DB search
MGSEQNEKIPNANEPTARIDDLNTLNQSGALTQGSGHVLIVNSQNNGKLDAFVTNLHNVP
YVYRQDTVIHKKTGTIGVVDEVAGDSDSDSSITDDEDDEDEGDEVDDEDEEGDADGNANA
NRSSDKNKGSSNYKNEILQADQVRVLWMDDTEPIQHVNDIQVVDRGFLHGDYVASASDPT
GQVGVVLDVNISVDLQVPDGSIIKDVSSRELKRVREFAIGDYVVLGPWLGRVDDVLDNVT
VLIDDGSMCKVVGAEPLRLKPVSKSMFDVDEHIPYYPGQRVRASSSSVFRNSWFQSGSWK
ANRLEGTVTKVRAGSVFIYWIASAGHGPDSSTAPAEEQSPKNLKLLSCFAHASWQVGDWC
HLPPAIRQSSSITLDQGLSKLGLYDSVKSELSSDQLENGCDSDQVAPEESDGNNETMDTD
PMVAPDGINGKTVSNGSSESSSCGSSASVSKDPVHETWPLHRKKIRKVVIRREKKARKKE
ENFEKALLVVNTRTRVDVAWQDGSIERGLESTLLIPIDSPGDHEFVAEQYVVEKSSDDID
NASEARRVGVVKSVNAKERTACVRWLKPVTRAEDPREFDKEEIVSVYELEGHPDYDYSYG
DVVVRLSPVSVSAQATSDGESVRELKWKATLNNSTVNVKKRSGSKKEDDEFIGEACLDFS
DLSWVGNITGLRNGDIEVTWADGMVSTVGPQAIFVVGRDDDDDSIAAGSEVSDDAASWET
VDDDEMDAVENGQEEVRLQNAAHGNSEAEVTLESNNSGRNPALSLPLAALDFVTRLATGF
FSRGRKNVDPDFSGSRGENGLQTQGVMDISEERDSADDTSSLKSNVIDNGGGQIIHDNVE
EHSTIDMEVPISSDAPDTLCNLSTDKSDTPTCFEDDTLSFKRFDIAKDPVDHYFLGSNAQ
INNGRKWLKKVQQDWNILQNNLPDGIYVRVYEDRMDLLRAVIVGAYGTPYQDGLFFFDFH
LPPEYPDVPPSAYYHSGGWRINPNLYEEGKVCLSLLNTWTGRGNEVWDPTSSSILQVLVS
LQGLVLNSKPYFNEAGYDKQIGTAEGEKNSLSYNENTFLLSCKTMMYLMRKPPKDFEGLA
QEHFRKRGYYILKACDAYMKGSLIGSLTKDASISNNENSNLTSVGFKLMLAKIVPKLYSA
LNEVGADCHDFKHLLQ
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtgaacaaaatgagaaaatccccaatgccaatgagcctactgctagaattgat
gatttaaataccttgaaccaaagtggtgctctgacacaaggttctggtcatgtcttgatt
gtaaatagtcaaaacaatggcaaactggatgcttttgtcacgaacctgcacaatgtacca
tacgtttatagacaagatactgtgatacataaaaagaccgggacgattggagtagtggat
gaagtagctggtgattcggattctgatagcagcattactgatgatgaggatgatgaagat
gagggagacgaggttgacgatgaggatgaagagggtgatgctgatggcaatgccaatgct
aacaggagtagtgacaagaacaaaggtagtagtaattataagaatgaaatccttcaggct
gaccaggtccgagtactttggatggatgacactgaacctatccaacatgttaatgatata
caagttgttgataggggattcttgcatggggattatgttgcttcagcttcagatccaact
gggcaagtgggtgttgtgctagatgtcaatatatctgttgatttgcaagttcctgatgga
tctattatcaaagatgtatcgtccagagagttgaagcgagtgagagagtttgctatcggt
gattatgtggtccttggtccatggttgggtagagttgatgatgttttagataatgtgact
gtgttaattgatgatggttccatgtgtaaagtagtgggggctgagccactacgtctcaaa
ccagtatccaagagcatgtttgatgtagatgaacatattccttactacccagggcagcgt
gtaagggcaagctcatcatcagtttttaggaattcttggttccaatcaggttcatggaaa
gctaatcggttggaaggtactgttaccaaagttagagcaggatcagtatttatctattgg
atagcatctgccggccatgggcctgattcttcaacagctcctgctgaagagcagagtcca
aagaacttaaaactgctgtcttgttttgcacatgcaagttggcaagtaggtgattggtgt
catcttccacctgctatcaggcaatcatcctcaatcaccttggaccaaggtctgtcaaag
ttagggctttatgattcagtcaaaagtgaattaagttctgatcaactggaaaatggatgt
gattcagatcaagttgcaccagaagaatctgatgggaataatgaaaccatggatactgat
ccaatggttgctcctgatggaattaatggaaagactgtaagtaatggttcatctgaatct
agctcatgtggtagttcagcatcggtttcaaaggatcctgtccatgaaacttggcctctt
catcgcaagaagatacgaaaagtggtaattagaagagaaaagaaggctcgaaagaaagag
gaaaactttgaaaaagcccttctagttgtcaataccagaacaagggttgatgtggcatgg
caggatggatctatagaacgtggactggaatcaacattgttgatcccaattgatagtcct
ggtgatcatgaatttgttgctgaacagtatgttgtggagaagtcctctgatgatatcgat
aatgcttctgaagctagacgtgttggggttgtaaaaagtgttaatgcaaaagagcgaaca
gcatgtgtaaggtggttaaagccagttaccagggcagaagatcctcgtgagtttgacaaa
gaggaaattgtaagtgtgtatgagctagagggacatccagactatgattactcctatggg
gatgtagttgttcgattatccccagtttcagtatccgcacaagcgacctctgatggggaa
tctgtcagagaactaaagtggaaagctacgctgaataatagtactgtaaatgtgaaaaaa
cgctcaggcagtaagaaagaagatgatgaattcattggtgaagcttgtctggacttctca
gatctctcttgggttggaaatataactggtctaagaaatggtgatattgaagtcacgtgg
gctgatgggatggtttcaacggttggacctcaagcaatctttgttgttggtcgagatgat
gatgatgactcaattgcagctgggagtgaagtaagtgatgatgcagctagttgggaaaca
gttgatgatgatgagatggatgccgttgagaatggtcaagaggaagttcggctgcaaaat
gctgcccatgggaactctgaggcagaagtaactctggagagtaataattctggaaggaat
ccagcattgtctcttcctttagctgcacttgactttgttacaagactggccactgggttc
ttctcaaggggacgaaaaaatgttgatccagatttttctgggtccaggggtgaaaatgga
cttcagacgcagggagtaatggatatttctgaggaaagggattctgctgatgatacaagt
tctctgaaatctaatgtcatagataatgggggtgggcaaattattcatgataatgtagaa
gaacattctactatagacatggaggtgccaatatcatcagatgcaccagacactttatgc
aatttgagcacagataaatcagatactccaacatgttttgaggatgatactctcagtttc
aaacgttttgatatagcaaaagatcctgtggaccattattttcttggttcaaatgcacag
attaacaacggaaggaagtggctcaagaaggttcagcaagattggaacattcttcagaac
aacttgcctgatggaatctatgtacgggtttatgaagatcgaatggatctcttaagggca
gtaattgttggggcatatggaacaccctatcaagatggactattcttttttgattttcac
cttccaccagagtatcctgatgtgccaccgtcagcatattaccattctggtggttggaga
ataaatccaaatttgtatgaggagggcaaggtgtgcctcagccttttaaatacgtggact
ggcagaggcaatgaagtttgggatccaacgtcttctagcatccttcaagttctagtttca
cttcagggtttagtgctaaattctaagccatattttaatgaagctgggtatgataagcag
attgggacagctgaaggagagaagaattcactatcatataatgaaaatacctttttactg
agttgcaaaacgatgatgtatcttatgcgaaagccccccaaggattttgagggccttgcc
caagaacatttcaggaaacgcggttactacattcttaaggcctgtgatgcatatatgaaa
ggcagtttaattgggtcccttactaaagatgcctctataagcaataatgagaattccaat
ttgacttcagttggtttcaagctaatgttagctaagattgtgccaaagctatactcggca
ttgaatgaagttggagctgattgtcatgattttaagcatctgctacaataa
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