KEGG   Manihot esculenta (cassava): 110613078
Entry
110613078         CDS       T05761                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
mesc  Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:mesc04812]
    110613078
Cytoskeleton proteins [BR:mesc04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     110613078
SSDB
Motif
Pfam: WD40 Katanin_con80 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_EML Beta-prop_SCAP Beta-prop_TEP1_C Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_EIPR1 NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_IFT140_1st WDR90_beta-prop_4th eIF2A Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_IP5PC_F Beta-prop_RIG_1st Beta-prop_DCAF12 Beta-prop_VPS8 Beta-prop_WDR19_1st PROPPIN VPS8_N PAN2_N
Other DBs
NCBI-GeneID: 110613078
NCBI-ProteinID: XP_021609701
LinkDB
Position
4:complement(21327177..21341404)
AA seq 803 aa
MTTKRAYKLQEFVAHSSSVNCLKIGRKSSRVLLTGGEDHKVNLWAIGKPNAILSLSGHTS
GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD
FKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETTGVRCLTFNPDGR
TLLCGLHENLKVFSWEPIRCHDAVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISR
IEPYAPGIVNRFNGYSEAKSGASGNQAILTESTAKTSLGRLSVSQNSESLVKETKSLARL
SVSQNSDPVKESTKESKVLASTGNLPGTPQRVSLNPGVKNTMAGPITGNAAAPKRNPIKA
QLAVNAPIFNKADIVPVIVPRTNMRPESVAESRKDIGIAGRTMPFSLQSKTSDYRKFPSG
RDDVDQSTISIPSESPSSKSTELSTIADRNTIPIVKGSLHGLSTVERNIKDDRPIGSGKQ
DSNLTTELPVRYQEENYGHKGNRDVTLTDNQKGGRMHSLVVNWEKRGRSPNYDGPTFGCF
PGTSAVNMLPFNTIKQRGPAQSTENETVSADNEDAIADVMEQHDQFISSMQSRLAKLQVV
YRYWERNDVKGAIGAMEKMADHGVLADVISIVTEKTDIVTLDLCTGLLPILAGLLESDMD
RHLSVSLDMLLKLVRTFGSMIYSTISASTSVGVDIEAEQRLERCNLCFVELEKVKRCLPN
LVRRGGSVAKSTQELNLALQEVS
NT seq 2412 nt   +upstreamnt  +downstreamnt
atgactaccaaacgcgcctacaagctgcaggaatttgtggcacattcttccagtgttaat
tgcctcaaaattgggagaaaatcgtcgagagttcttcttactggaggagaagatcacaag
gtcaatctctgggctatcggtaagcccaatgctatactgagtttatctggacatactagt
ggaattgattcagtaagctttgactcttcagaagtcctagtggctgctggagctgcaagt
ggcacaatcaagctttgggatttagaggaggcaaagattgttcgaacgctgactggtcat
agatccaactgcatatctgtggactttcatccttttggggagttctttgcgtctggttca
ttggacacaaatcttaagatatgggatatcagaaaaaagggttgtattcatacttacaag
ggccacactcgaggggtcaatgcaatcagatttaccccagatggccgttgggttgtatct
ggtggagaagacaacactgtgaagttgtgggatttgactgctgggaagttattgcatgat
ttcaagtgtcatgaagggcagattcagtgcatagattttcatccccatgagtttctactg
gcaacaggttctgctgataggactgtcaaattttgggaccttgagacctttgaactaatt
ggttcagctgggcctgagactactggagtgcgttgtttaaccttcaatcctgatgggagg
actctactttgcggattgcatgaaaatctgaaagttttctcctgggaaccaataagatgc
catgatgctgtggatgtgggatggtctagattgtctgatctcaatgtacatgaaggaaag
cttcttggctgctcatataatcaaagttgtgttggagtatgggttgtggacatctcgcgt
attgaaccatatgcacctggaattgttaatcgattcaatggttattcagaagctaagtca
ggtgcaagtgggaatcaagcaatattgactgaatccacagcaaagaccagtttgggaagg
ttatcagtttcgcaaaattcagaatctttagtaaaggaaacaaaatctcttgcaaggttg
tcagtttctcaaaattctgatcctgttaaggagtcaacaaaggagtcaaaggttttggca
tccacaggaaatctacctggtacgccacaaagggtcagcttgaaccctggtgtgaagaat
accatggctggtccaataacaggtaacgcagcagctccaaaaaggaatcctataaaggcc
caattagcagttaatgcaccaatcttcaacaaggcagatattgtacctgtaattgtccct
agaactaatatgaggcctgaatcagtagctgaatctagaaaagatattggtattgctgga
agaacaatgccattttctttgcagtcaaagacgagtgattacaggaaatttcccagtggc
agagatgatgtggatcaatcaactatttctatcccttctgagtctccaagttccaagtct
acagaattgagcactattgcagataggaatactattcctatagttaaaggctcacttcac
ggattgtcaactgtagagaggaatattaaagatgatagacctattggatcaggaaaacag
gattcaaatttgacaacagaactgcctgtgagataccaggaggaaaattatggacataaa
ggaaatcgagatgtgaccttgacagataatcagaaaggaggaagaatgcattcacttgtc
gtaaattgggaaaaaagggggagatctcctaattacgatggaccaacttttgggtgtttt
ccggggacatctgcagtcaacatgcttcctttcaatacgattaaacagagagggcctgcc
caatctactgaaaatgaaacagtttctgctgataatgaggatgctatcgcagatgtgatg
gaacaacatgatcagtttattagctccatgcagtctcgcttagcaaagttacaggttgta
tatagatattgggaaagaaatgatgttaagggggccattggtgcaatggagaagatggct
gatcatggtgttcttgcagatgtaatcagtattgtgaccgagaaaactgacattgtgaca
ttggatctttgtactggtcttctgccaatccttgctggccttcttgaaagcgacatggat
aggcatttgagtgtctctctggacatgctgcttaagctggtcagaacgtttggttcaatg
atctactcaactatctcagcatcaacatctgttggtgtagatattgaagcagaacaaagg
ttggaacgttgcaacctctgctttgtagaacttgagaaagtcaagcgttgtttgcctaac
ctcgtgagaagagggggctcagttgcaaagtccacacaggagctgaatctagctcttcaa
gaagtttcgtga

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