Manihot esculenta (cassava): 110613150 Help Entry 110613150         CDS       T05761                                  Name (RefSeq) DNA mismatch repair protein MSH6   KO K08737   DNA mismatch repair protein MSH6 Organism mesc  Manihot esculenta (cassava) Pathway mesc03430   Mismatch repair Brite KEGG Orthology (KO) [BR:mesc00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     110613150  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:mesc03400]     110613150 DNA repair and recombination proteins [BR:mesc03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      110613150 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MutS_V MutS_III MutS_I MutS_IV MutS_II Agenet Motif Other DBs NCBI-GeneID:  110613150 NCBI-ProteinID:  XP_021609826 LinkDB All DBs Position 1:complement(39219531..39228805) Genome browser AA seq 1308 aa AA seqDB search MAPARKPSNGRSPLVNPQRQITSFFSKASSPSPSPSPLPASTLSKGQSPKLNPNPKRPSP SSPSTPSPLQSKMKKPLLVIGQTPSPSASPSASTPATAIKSYGKEVVDKRIRVYWPLDKS WYEGYVKSYYEDSGKHLVEYDDFEEEVLDLGKEKIEWVEETVKKFKRLRRGSLSFKKTVI EDEIEEMEDVGNIEEGNDGDDSSDEDWGKNPEMDVSDEGDMDLGDEQEVDNDRVGKNEKQ GGKSESRKRKVCGAGKLVCGKKSEDTGNVSKKELKVSVVEQVKNKDVVSGLGNALTSNAS ERFSARETGKLWFLGAEQRDAKRRRPGDAHYDPRTLYLPPNFVKSLSGGQRQWWEFKSKH MDKVLFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRV LVIEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLAANPDASYLMAVTER CQNLENENFERVFGICVVDVATSRIFLGQFKDDAECSSLCCLLSELRPVEIIKPAKMLSS ETERVMLKQTRNPLVNELVPLSEFWDSEKTVCEVKAIYRRITDQSAPGSLNKADIDTAEL HIAEDGSSCLPEILSKLVNKGENGSLALSALGGTLYYLKQAFLDETLLRFAKFESLPCSD FCNVAQKPYMILDAAAMENLEIFENNRNGGSSGTLYAQLNHCVTASGKRLLKTWLARPLY DLRSIEDRQDAVAGLRGANQPIALEFRKALSRLPDMERLLARICASSEASGRNANKVILY EDAAKKQLQEFITALRGCELMAQACSSLCAILENAESRQLHHLLTPGEGLPNVHSILKHF KEAFDWVEANNSGRIIPHEGVDVEYDSACKKVREIESSLTKHLKEQRKLLGETSISYVTV GKEAYLLEVPEHLGGNIPRDYELRSSKKGFYRYWTSSIKKFLGELSQSESEKESTLKSIL QRLIGRFCKHHDKWRQLVSATAELDVLISLAIASEFYEGPACRPIVLGCQSSEVPRLSAK SLGHPILRSDSLGKGAFVPNDINIGGSVGASFVLLTGPNMGGKSTLLRQVCLAVILAQVG ADVPAESFELSPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLSSATRNSLVALDELGR GTSTSDGQAIAESVLEHFVHKVQCRGMFSTHYHRLAVDYKKDPKVSLCHMACQVGNGIEE LKEVTFLYKLTPGACPKSYGVNVARLAGLPNSILEKAAAKSREFEAVYGKHRKSSGNEMV ALIQNLIDAATKLSCHGFDIRAIAKLQLRARLLLPQNGSGINLSSESR NT seq 3927 nt NT seq  +upstreamnt  +downstreamnt atggcaccggcgcgtaaaccaagcaatggcagatcgccgctggtcaatccacagcgccaa atcacttctttcttctcgaaagcatcttctccttctccttctccttctccactccctgcc tccactctctccaaaggacagtcccccaaacttaaccctaaccctaaacgtccaagccct agtagcccttccactccttctcctctacaatccaaaatgaaaaaaccgctattagtcatt ggccaaactccctctccatctgcatcgccatctgcttcaacgcctgcaaccgccattaag tcgtacggcaaagaagtggtggataagaggattagggtttactggccgttggataagagc tggtacgagggttacgttaaatcttattatgaggattctggtaaacatttggttgagtac gatgattttgaagaggaagtgttggatttgggaaaggaaaaaattgagtgggttgaggaa actgtgaagaaatttaagcgcctacgaaggggttctttgtctttcaagaagacagtgatt gaagatgaaattgaagagatggaggatgtcggtaatattgaagaaggcaatgatggtgat gattctagtgatgaagattggggaaagaatccagagatggacgtcagtgatgagggtgat atggatttgggggatgagcaagaagtggataatgacagggtcggcaaaaatgaaaagcag ggtgggaagagtgaatcaaggaaaaggaaagtttgcggagctggaaagctggtttgtggg aagaagagcgaggacactgggaatgtgagtaaaaaagagttgaaagtttcagttgtggag caagttaagaataaagatgtggtgtctggccttggtaatgctttgacaagtaatgcttct gaaaggttcagcgcacgtgaaactgggaaattatggtttcttggagcagaacagagggat gcaaaaaggaggcgccctggagatgcacattatgatccaaggactctgtacctgcctcca aattttgtaaagagtttatcaggtggtcagagacaatggtgggagtttaaatcaaagcat atggataaagtgttgtttttcaagatgggcaaattttatgagctttttgaaatggatgcc cacgtaggagctaaggaattagatttgcaatatatgaagggagaacaacctcattgtggt tttccagagaggaatttctcaatgaatgtggaaaaactggcaagaaagggttatcgagtt cttgttatagagcagacagaaacacctgaacaactggaacttcgtcgcaaagagaaagga tctaaagacaaggttgtgaaacgtgaaatatgtgcagtggttacaaaaggaacactaact gagggagaattacttgcagcaaatcctgatgcttcttatctaatggcagtgacagaaagg tgtcagaatttggaaaacgaaaattttgagcgggtttttggtatctgtgtggttgatgtt gctaccagcagaatctttcttgggcagtttaaggatgatgcagaatgcagttcattgtgt tgtctattatctgagctgaggccagtagaaattataaaacctgcaaaaatgctcagctct gaaactgagagagtaatgctgaagcaaacgaggaatcctttagtaaatgagttggttccc ctctctgaattctgggattcggagaaaactgtttgtgaagtcaaggccatctacaggcgg atcacagatcaatcagcccctggatctttaaataaagcagatatagatacagcagaactt catattgcagaagatgggtcaagctgcctaccagaaattttgtcaaagctagtaaataaa ggagaaaatggcagcctagccctttcagctcttggaggaactctctattatctaaaacag gcttttcttgatgagactttgcttagatttgcaaagtttgaatcacttccatgctctgat ttctgtaatgttgctcaaaaaccatacatgattcttgatgctgctgcgatggagaatctt gagatctttgagaataacagaaatggaggctcttcagggacactttatgcacaactgaat cactgtgtgacggcatctgggaagagattgctgaagacatggctagcaagacctctatat gatttgagatctatcgaggaccgccaggatgctgtggcaggtctacggggggcaaatcaa cctattgcattggaatttcgaaaagcattgtctaggcttcctgacatggagcgattactt gcacgcatatgtgctagcagtgaagctagtggaagaaatgcaaataaggtaattttatat gaggatgcagcaaagaagcagctccaggagttcataactgctctccgtggctgtgaatta atggcccaagcatgttcttcactttgtgccattttggaaaatgctgagtccaggcaacta catcatttgctaacacctggtgaaggtcttcctaatgtccattcaattcttaaacatttt aaggaagcttttgattgggtggaagccaacaattctggacgtataatacctcatgaagga gttgatgtggagtatgactctgcatgtaagaaagttagggaaattgagtccagcttgaca aaacaccttaaggaacagcgaaagttacttggagagacatcgatcagttacgtcacagtt ggaaaagaagcctatctattagaagtcccagaacatttgggtggcaatattcctcgagat tatgaattgcgatcttccaaaaaggggttttacaggtattggacttcaagcattaagaag ttcttaggagagctctcccagtccgagtctgaaaaggaatcaaccttgaagagcattttg cagagattgattgggcgtttctgcaaacatcatgataagtggagacaactggtttctgca acagcagaactggatgttttgattagtttggcaattgctagtgagttctatgaaggacct gcatgccgcccaatcgtcctgggttgtcaatcaagtgaagtgccacggttatctgcaaaa agtttggggcaccctattcttagaagtgattctttaggcaagggtgcatttgtgccgaat gacatcaatattggcggtagtgttggtgccagttttgtccttctcactggtcctaacatg ggtgggaagtctactcttctccggcaagtttgtttagctgtgattctggcccaggtagga gctgatgtccctgcagagagctttgaattgtcacctgtcgaccgaatatttgtccggatg ggtgcaaaagatcatattatggcaggtcaaagtacattcttaacggagctttcagaaact gcattgatgctgtcatcagccactcgtaattcattggtggcactggatgaactcggacgt ggcacatcaacatcagatggacaagcaatagcggaatcagtacttgaacattttgtccac aaggtgcagtgtcgaggaatgttttcgactcactatcatcgattagctgtagactataag aaagatcccaaggtctccctctgccacatggcatgtcaagtgggaaatgggattgaggaa ttgaaagaagttacatttctatataagttgacacctggtgcatgtcctaaaagctatggt gtcaatgtagcaagactggctggactccccaattctatacttgaaaaagctgctgcaaaa tccagagaatttgaggctgtatatggcaaacacagaaagagtagtggtaatgaaatggta gccttgatccaaaatttgattgatgctgctacaaaattgagttgccacggttttgatatc agagcgatcgctaaacttcagctcagagcgagactacttctgccacaaaatggaagtggt atcaacctgtcttccgagagtaggtag

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