Manihot esculenta (cassava): 110613228
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Entry
110613228 CDS
T05761
Name
(RefSeq) vacuolar protein sorting-associated protein 51 homolog isoform X1
KO
K20296
vacuolar protein sorting-associated protein 51
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110613228
Membrane trafficking [BR:
mesc04131
]
Protein recycling
Others
EARP complex
110613228
Endosome - Golgi transport
Tethering complex
GARP complex
110613228
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS51_Exo84_N
Sec5
Dor1
EXOC6_Sec15_N
COG5_N
Tma16
Lip_prot_lig_C
COG2_N
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
110613228
NCBI-ProteinID:
XP_021609946
LinkDB
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Position
1:complement(39268382..39279650)
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AA seq
774 aa
AA seq
DB search
MGVDDVPLDDKAKRMRDLLSSFYSPDPATSSGNSSNFDSLDAINTTSFDADQYMNLLVQK
SNLEGLLQKHVEMAAEIKNLDTDLQMLVYENYNKFISATDTIKRMKNNIVGMEANMEQLL
EKIMSVQSRSDGVNTSLFEKREHIEKLHHTRNLLRKVQFIYDLPARLGKCIKSEAYGDAV
RFYTGAMPIFKAYGDSSFQDCKQASEEAMSTVIKILQGKLFSDTESIQTRAEAAVLLKQL
DFPVDSLKAKLFEKLEQSLEDLQLKTEEITNVLENSNDPTNLATTNDASVHEFVEAIRAY
RVIFPNSEKQIIKLAQDLITKHFEITQQYIKEHISVSKFLGVLRIIWRDVLLMDEVLNEA
FLPDYSLEAAQGVVKQYVASTFSHLLRDISDGLTVNVQTKRKEGEEELPLQVALETSKNA
VLKGSMDVLVDLHYLLDDNLGFLLKLRDSIIDWVQEGFQDFFRALDKQFLLLSGKNKSAS
QEQGLAEGIVVDKVLAGLVLVLAQLSVFIEQTVIPKITEEIATSFSGGGVRSFENGPAFV
PGEICRIFRSDGEKFLHHYINMKTQRVSVLLKKRFKAPNWVKHKEPREVHMFVDLFLQEL
EAIGAEVKQVLPQGGLRRHRRSESNGSTTSSRSNQLRDDRMTRTNTQRARSQLLETHLAK
LFKQKVEIFTKTEFTQESVVTTIVKFCLKSLLEFVRLQTFNRSGFQQNQLDIQFLRAPLK
ETVEDEAAIDFLLDEVIVGTSERCLDPILLEPPILDKLIQAKLAKKREENAITP
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgggggttgatgatgtgcctctggatgacaaggcaaagagaatgagagatctgctatca
agcttctactctccagatcctgcaacgtcatccggcaactcttcgaatttcgattcttta
gatgccataaacacaacatccttcgatgctgatcagtacatgaatctcttggtgcaaaag
tcaaacttggaaggacttctgcagaagcacgttgaaatggcagccgagataaaaaatctt
gacactgatttgcaaatgttagtttatgaaaattacaataagttcatcagtgctactgat
acgatcaagaggatgaaaaataatatcgtgggcatggaagcaaatatggagcagctcctt
gagaaaataatgtcagtgcaatcaagaagcgatggtgtaaacacatctctttttgaaaag
agggaacatatagagaaattgcatcacacacgcaaccttcttcgtaaagttcagttcata
tacgatctgcctgctagacttgggaagtgtattaaatcggaagcatatggtgatgcagtc
aggttctacactggagcaatgccaattttcaaggcatatggggattcatcattccaggac
tgtaagcaagcatctgaagaagctatgagcacagttataaaaattttgcagggaaagctt
ttttcagatactgaatccatacaaacaagggctgaggctgcagtgcttcttaagcagttg
gattttccggtggacagcttaaaggctaaactatttgaaaagttggaacaatctcttgag
gaccttcagcttaagacagaagaaataaccaatgttttggagaactctaatgatcctaca
aatcttgctaccacaaatgatgcttccgttcatgagtttgtggaggctatccgagcttat
cgagtaatatttcccaattcagaaaagcaaataattaaactcgctcaagatttgattacc
aagcactttgaaattactcagcaatacataaaggagcatatttctgtttcaaagtttttg
ggtgttcttcgaattatatggagagatgtgcttctgatggatgaagtgctaaatgaggct
tttctccctgattattctttggaggctgcccagggggttgtcaagcagtatgttgcgagt
acattttctcatcttctgcgtgatatctcagatggccttactgtcaatgtccaaacgaaa
aggaaggagggagaggaagagcttccattgcaggttgccctggaaactagcaaaaatgca
gtgcttaaaggaagcatggatgtcttagtggaccttcactatcttcttgatgacaactta
ggctttcttctaaaattaagagactcgattattgattgggttcaagaaggatttcaagat
ttcttcagggctctggataaacagttcctcttgctttctggaaaaaataaatcagccagt
caagaacaaggtttggcagagggaatagtagttgacaaagtgcttgccggtcttgtcctg
gtgctggctcagctttctgtttttattgaacaaactgtcatcccaaaaattaccgaggaa
atagctacttctttctctggtggaggcgttcgaagctttgaaaatgggcctgcatttgtt
cctggtgaaatttgtcgaatctttcggtcagatggtgaaaagtttctacaccattatata
aatatgaaaactcagagagtatcagttctcctgaagaagaggtttaaagctccaaactgg
gtcaagcacaaggagccaagagaagttcacatgtttgttgatttatttcttcaagagttg
gaagcaataggtgctgaggtgaagcaggttttacctcaaggaggtcttcgtaggcatcgt
cgctctgaaagcaacggcagcaccacatcctcacgcagcaatcaattacgagatgataga
atgactcggacaaatacccaaagggccaggagccagcttctagaaacccaccttgcaaaa
ttgttcaagcaaaaagtagaaatttttacaaaaactgaatttacacaggaatctgtggta
accactatcgtaaaattttgccttaaaagtttgctagaatttgtcagacttcagactttc
aaccggagtgggtttcagcaaaatcagttagacattcagttcctaagggctcctctaaag
gaaacagttgaagatgaagcagccatcgactttttgcttgatgaggtaattgttggtact
tcagaacgttgtcttgacccaattcttctggagcctcctatcttggacaaactaatacaa
gcaaagttggccaagaagagggaagagaacgcaattactccataa
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