Manihot esculenta (cassava): 110613256
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Entry
110613256 CDS
T05761
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 7
KO
K05391
cyclic nucleotide gated channel, plant
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
110613256
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mesc04040
]
110613256
Ion channels [BR:
mesc04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
110613256
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
IQ
PBP1_TM
Motif
Other DBs
NCBI-GeneID:
110613256
NCBI-ProteinID:
XP_021609990
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Position
4:30701772..30706878
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AA seq
745 aa
AA seq
DB search
MFDCGYKSQYIGGQREKFVRLDDLDSTLSLETSITANRGMKKFWLSLEGFSLSGSGAKNP
RQSFTVGMKKGSEGLITIGRHIKTGVTRAVFPEDLKVSEKMIFDPQDKSLLLWNRLFVMS
CILAVSVDPLFFYLPVFNYKMACLGMDTKLAAAITSVRTMLDAFYLLRMALQFRTAYVAP
SSRVFGRGELVIDPAQIAARYLGRYFTADFLSVLPFPQIVVWKYLNNKKKGSEVLATKRT
LLGLVFLQYIPRFLRFVPLASDLKKTAGAFADSAWAGAAYYLLWYLLASHIAGAFWYLLA
VERKDTCWQKACTESIKCDISFLYCGNKILPGFHEWRRVSDDVLSNNCSVDDDGNSSFHY
GIYTQAMSSDIVASRKFVTKFFYCLWWGLQNLSTLGQGLQTSTYPLEVLFSIAIAISGLI
LFALLIGNMQTYLQSITIRLEEMRIKRRDSEQWMHHRLLPEELKERVRRYDQYKWLETRG
VDEESLVQNLPKDLRRDIKRHLCLNLVRRVPLFANMDERLLDAICERLKPSLYTEQTYIV
REGDPVDEMQFIIRGRLESVTTDGGRSGFFNRGFLKEGDFCGEELLTWALDPKAGTSLPS
STRTVMALTEVEAFALEAEELKFVASQFRRLHSRQVQQTFRFYSQQWRTWAAILIQASWR
KYARRKAAELRMQEEAAEYDEEDDDGDDDEKALVPPSSLCRLGATFLVSRFAANALRAHR
LRSASSGPSLLTPQKPPEPDFSVDE
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgtttgattgtggttacaagtcacagtacattggtggccagagggagaaatttgtgaga
ttggatgatttggactctacattgtcattggaaactagcattacggcaaacagaggaatg
aagaaattctggttgagtttagaaggattctcccttagcgggagcggagcgaagaatcct
agacaatctttcacggttgggatgaaaaagggatcagaaggactgataacaattggtcga
catataaaaactggagtcactcgtgcagtatttcctgaggatcttaaagtgtctgagaaa
atgatatttgatcctcaagacaaatctctcctcctatggaataggctttttgtcatgtcc
tgcattctcgcagtgtctgttgatcctttgttcttttatctaccagtctttaactataaa
atggcgtgtctgggcatggatacaaagctagcagccgcaattacgtctgtccggacaatg
cttgatgctttctatctgcttcggatggcacttcagtttcgtacagcttatgttgcgcca
tcgtcgagggtctttggccgaggtgaacttgtcatagatcctgcacagattgctgcccgt
tatttaggtcgttatttcacagctgatttcctttctgtgctccccttcccacagatagtg
gtatggaaatatcttaataacaaaaaaaaaggttcagaggtattggctactaaacgaacg
ttgttaggtctcgtctttcttcaatacatcccaagatttctccgctttgttcctttggct
tcagacctaaaaaagacagctggtgcttttgctgatagtgcctgggctggtgctgcatac
tatttgctttggtacttgcttgccagtcatatagctggggctttctggtacttactagct
gtcgaacgcaaggacacatgctggcagaaagcttgcactgaaagtataaaatgtgacata
agcttcttatactgtggaaataagatattgccaggtttccatgagtggcgaagagtcagc
gatgatgtcctttcaaacaactgtagtgtagatgatgatggcaattcatcatttcattat
ggaatctacacacaagctatgtcatcagacattgtagcttcaaggaaattcgtcactaaa
ttcttttactgtttatggtggggcttgcagaacttgagtacacttggtcagggtcttcaa
accagcacctatcctttagaggttctattttccattgcaatagccatttctgggcttatc
ctctttgcgcttctgattggaaacatgcagacctaccttcagtccattacaattcgtcta
gaggagatgagaatcaaaaggcgtgattcggagcaatggatgcatcatcgcttgcttcca
gaggagctcaaggagcgagtcaggcgatatgatcaatacaaatggttggaaactcgggga
gtggatgaagaaagtttggtccaaaatctaccaaaagatctcagaagagatatcaagaga
catctttgtttaaatttggtcagaagggttcctctatttgccaatatggatgaaaggctg
ctagatgctatatgtgaaagactgaagccaagtctatacacagagcaaacttatatagtc
cgtgaaggtgaccctgtcgatgagatgcaattcattattcgtggccgtctagagagtgtg
actactgatggtggaaggagtggatttttcaacagaggattcctaaaagaaggagatttt
tgtggagaagagcttctaacttgggcactagaccctaaagctggtactagcttaccatca
tctacaagaacagtcatggccctaactgaagtagaggcttttgccttagaagctgaagag
ctgaaatttgttgcaagtcagttcaggcgtcttcatagcaggcaagtgcagcaaacattc
cgtttttactcacagcaatggaggacttgggctgccatattaatacaagcttcttggcgt
aagtatgcaaggaggaaagcggcagaactgcgtatgcaagaagaagcagcagaatatgat
gaggaagatgatgatggtgacgacgacgagaaggcgttagttccaccaagtagtttgtgc
aggcttggtgcgacatttcttgtttctcggtttgcagccaacgctcttcgtgcacacagg
cttcgcagcgcaagtagtggtccaagtttgctgacgccacagaagcccccggaacctgac
tttagcgtagatgagtag
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