Manihot esculenta (cassava): 110613308
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Entry
110613308 CDS
T05761
Name
(RefSeq) importin beta-like SAD2 isoform X1
KO
K20223
importin-7
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110613308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mesc03009
]
110613308
Ribosome biogenesis [BR:
mesc03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
110613308
Pre-60S particles
110613308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBN_N
TPR_IPO11
Cse1
HEAT_IPO9_c
Xpo1
Motif
Other DBs
NCBI-GeneID:
110613308
NCBI-ProteinID:
XP_021610057
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All DBs
Position
4:complement(9574410..9585442)
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AA seq
1032 aa
AA seq
DB search
MDLPSLALILQAALSPNPDERKAAEQSLNQFQYTPQHLMRLLQIIVDNNCDMAVRQVASI
HFKNFIAKNWAPHEPDEQSKISQSDKDAVRDHILMFVVQVPPLLRVQLGECLKTIIHADY
PEQWPRLLDWIKHNLQDQQVYGALFVLRILSRKYEFKSDEERTPVYRIVEETFPHLLNIF
NRLVQIANPSLEVADLIKLICKIFWSSIYLEIPKQLFDPNVFNAWMILFLNVLERPVPVE
GQPVDPELRKSWGWWKVKKWTVHILNRLYTRFGDLKLQNQENRAFAQMFQKNYAGKILEC
HLNLLNVVRLGGYLPDRVTNLILQYLSNSISKNSMYNLLQPRLDVLLFEIVFPLMCFNDN
DQKLWDEDPHEYVRKGYDIIEDLYSPRTASMDFVSELVRKRGKENLQKFIQFIVEIFKRY
DEAPVGYKPYRQKDGALLAIGALCDKLKQTEPYKSELERMLVQHVFPEFSSPVGHLRAKA
AWVAGQYAHINFSDQNNFRKALHSVVSGLRDTELPVRIDSVFALRSFVEACKDLNEIRPI
LPQLLDEFFKLMNEVENEDLVFTLETIVDKFGEEMAPYALGLCQNLAAAFWRCMNTAEAD
DEADDPGALAAVGCLRAISTILESVSRLPHLFVQIEPTLLPIMRRMLTTDGQEVFEEVLE
IVSYMTFFAPSISLDMWSLWPLMMEALADWAIDFFSNILVPLDNYISRGTAHFLTCKEPD
YQQSLWTMISSIMADRNLEDSDIEPAPKLIEVVFQNCKGQVDQWVEPYLRITVERLHRAE
KSYLKCLLIQVIADALYYNAALTLSILQKLGVATEIFNLWFQMLQQVKRSGARANFKREH
DKKVCCLGLTSLLSLPANQLPGEALERVFRTTLDLLVAYKDQVAEAAKEEEAEDDDDMDG
FQTDDEDDGDGSDKDMGVDAEDGDEADSIKLQKLAAQAKAFRPHDEDDDDSDDDYSDDEE
LQSPIDEVDPFIFFVDTMKAVQATDPLRFQNLTQTLDFHHQALANGVAQHAEQRRAEIEK
ERMEKASAAVAS
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atggatctccctagcctcgctttgatcctccaagctgctctcagccccaatcccgatgaa
cgcaaagccgctgagcaaagcctcaatcagttccagtacacccctcagcatctgatgagg
ttgctgcagatcatcgtggacaataattgcgatatggcagtgcggcaagttgctagtatt
catttcaagaacttcattgcaaagaactgggcacctcatgaacctgatgagcaatcaaag
atatcacaaagtgataaggatgctgtgagggatcacatccttatgtttgttgtgcaagtt
cctcctttgttgagggtgcagttgggtgagtgcctcaagacaattatccatgctgactac
ccagagcagtggccacgtcttttggattggatcaaacataatttacaagatcagcaagtt
tatggagctttgtttgtattgcggattctttctagaaaatatgagttcaagtcagatgag
gagaggacacctgtttatcgtattgttgaggagacgttcccacatcttctcaatatcttc
aacaggcttgtgcagattgcaaatccttcattagaagtagcagatttaatcaagcttatt
tgtaaaatattttggtcatctatatatctggagattccaaagcagttatttgatccaaat
gtcttcaatgcgtggatgattcttttcttaaatgttctggagaggcctgttcctgtagag
ggtcagcctgtagatcctgaactcaggaagtcatgggggtggtggaaggtgaagaagtgg
acagttcatattttgaacaggctgtacactcgatttggagatttaaaacttcaaaaccaa
gagaacagagcttttgcccaaatgtttcagaagaattatgcagggaagattttggagtgc
cacttgaatttgttgaatgtggtgcgtcttggtggatatttgcctgacagagttacaaac
ctaattttgcagtatctaagtaacagtatatcgaagaatagcatgtataatctcctgcaa
ccacgcctagatgtccttctttttgagatagtttttcctcttatgtgcttcaatgacaat
gatcaaaagctttgggatgaagacccccatgaatatgttaggaaaggttatgatattatt
gaggatttgtacagtccgaggactgcttcaatggatttcgtcagtgaattggttagaaaa
cgtgggaaggagaaccttcaaaagtttattcaattcattgtagaaatttttaagaggtat
gatgaagcaccagtaggatataaaccctatcgacaaaaagatggtgctttacttgctatt
ggagcgctttgtgacaaactgaaacaaactgaaccttacaaatctgaactggagcgtatg
ttagtgcagcatgttttccccgagtttagcagccctgttggtcatcttagggcgaaggcg
gcttgggttgcaggacaatacgcgcatattaacttctcagaccagaacaatttccgtaaa
gccttgcacagtgttgtttctgggttacgagatacagagctcccggttcgtattgattca
gtttttgcattgcgaagctttgttgaagcttgcaaggacttaaatgaaattcgccccatt
cttccccaactgcttgatgagttctttaaactgatgaatgaggtagaaaatgaggacctg
gtttttactctggaaactatagtggacaaatttggagaggaaatggcaccctatgctcta
ggtttatgccagaatttggctgctgcattttggaggtgtatgaacactgcagaagctgat
gatgaagctgatgatcctggtgctttggcagcagttggttgtttacgtgctataagtaca
attcttgaatcagttagcaggcttcctcatctctttgtccagattgaaccaactttgctt
cctataatgcgtagaatgttgacgactgatggtcaagaggtgtttgaagaagtactggaa
attgtttcatacatgacctttttcgctccaagtatatctctggacatgtggagtctttgg
cctttgatgatggaagcattggcagattgggctattgatttcttttcaaatattctggtt
cccttggacaactacatatcaaggggaactgcgcatttcctcacatgcaaggagccagat
taccaacaaagcctttggactatgatttcatctatcatggctgatagaaatttggaagac
agtgatattgagccagcaccaaagctgattgaagttgttttccagaattgtaagggccag
gtggatcagtgggttgagccatatctgagaatcactgttgaacgattgcatcgagcagaa
aaatcatacttgaaatgtcttctcattcaagtgatagcagatgccctttattataatgca
gctttgacgctgagcatactgcaaaagcttggtgttgctactgagatttttaacctttgg
ttccagatgttgcaacaagtgaaaagaagtggtgcaagagctaattttaaaagggagcat
gacaagaaagtttgttgtttggggttgacatcactactttcacttcctgcaaatcaatta
cccggagaggccttggagcgtgttttcaggaccactcttgatctcctagttgcatacaag
gatcaagttgcagaagctgcaaaggaagaagaagctgaagatgatgatgatatggatggt
ttccaaactgatgatgaagatgatggtgatggttctgacaaggacatgggagttgatgct
gaggatggggatgaagctgacagcattaaacttcaaaaattggctgcacaggcaaaggcc
ttccgaccacatgatgaggatgatgacgactcggatgatgactacagcgacgatgaagag
ttgcagtcaccaattgatgaggtggatcctttcattttctttgttgatactatgaaagcc
gtgcaagcaacagatccattaaggttccagaatctaacacagacactggacttccaccac
caagcgcttgcaaatggtgttgcccaacatgctgaacagaggagagcagagattgaaaag
gaaaggatggagaaggcatcagctgctgttgcttcataa
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