KEGG   Manihot esculenta (cassava): 110613346
Entry
110613346         CDS       T05761                                 
Name
(RefSeq) transportin MOS14 isoform X1
  KO
K15436  transportin-3
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc03013  Nucleocytoplasmic transport
mesc03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    110613346
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    110613346
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mesc03016]
    110613346
Transfer RNA biogenesis [BR:mesc03016]
 Eukaryotic type
  tRNA transport factors
   tRNA import factors
    110613346
SSDB
Motif
Pfam: Xpo1 TPR_TNPO3_IPO13_2nd TPR_TNPO3_IPO13_4th IBN_N TPR_TNPO3_IPO13_3rd
Other DBs
NCBI-GeneID: 110613346
NCBI-ProteinID: XP_021610113
LinkDB
Position
4:30135205..30154506
AA seq 1013 aa
MDLQIKVAQAVHVLNHDTQSCNRVAANQWLVQFQQTPDAWEVATSILTSDQLHLHLQPFF
SEFEVEFFAAQILKRKIQSEGYYLKLEVKDALLNALLVAAKRFSSGPPQLLTQICLALAA
LILRAVEHGKPIEQLFYSLQTLQNQDDGNIAVLEMLTVLPEEVVDTQNTDTSISPAHRSQ
YGQELLSHTPTVLEFLLDQSQKMYDGGLQLHEKNRKVLRCLLSWVRAGCFSEIPQGSLPT
HPLLNFVFNSLQVSASFDVAIEVLVELASRHEGLPQVLLCRVHFLKEALLLPALSNRNEK
YISGLACLMSEIGQAAPSLIAEGGVEALALADALLSCVAFPSEDWEIADSTLQFWSTLAS
YILGLDMESAKDGKHVKDVFFSVFSALLDALLLRAQVDESTFNDESGMLDMPDGLVQFRI
NLAELLVDICQLLRPATFVQKLFFDRWASATVPVPWKEVEAKLFALNVVSEVVLQEGPTF
DFSVIMQLATMLSSGPSDKLKGFTCNVYRSLADVVGCYSKWISTFQTNARPLLLFLAAGI
SEPQCSNACASALRKFCEDASAVICEPSNLEILMWIGEAFEKTRLPLEDEEEVVSAISVI
LGSVPNKELKNNLLARLLSSTYDAIGKLIEEDNDHSFSQNPATYTQILNSAARGLHRIGT
VFRHLATPQPSVPGEDDTIFGLLRIFWPMLEKLFRSEHMESSNLSTAACRALSLAIQSSG
QHFVMLLPNVLDCLSSNFLSFQSHECYIRTASVVIEEFSNREEYGPLFIKTFERFTQAAS
VMGLNSSYICDQEPDLVEAYTTFASTFVRSSRKEVLAASGSLLEVSFQKAAICCTAMHRG
AALGAMSYLSCFLEVSLASLLESMSIPEGSYGAITIQVISHSGEGLVSSVVYALLGVSAM
SRVHKCATILQQLAAICSFSERTTWKAILCWESLRGWLHAAVQALPVEYLKQGEAETLVP
IWLDALVGAASDYLKSRSCRSGENNYGHMQGKGGRVLKRLVREFADSHRNIPS
NT seq 3042 nt   +upstreamnt  +downstreamnt
atggacttgcaaatcaaggtagcccaagccgttcatgtcttgaatcatgatactcagtcg
tgtaaccgcgtggctgctaatcaatggctggttcagttccagcaaacccccgatgcttgg
gaggttgccacttctattctcacctccgatcagcttcatctccatctccagccttttttc
tcggagtttgaagtcgagttctttgctgctcagattctcaagcgaaagatccagagtgaa
ggatattacttgaagttagaagttaaagatgcattgctaaatgctcttcttgtggctgct
aaaagatttagttcgggccctccccagcttttgacacaaatatgtcttgcacttgctgcg
cttatacttcgtgctgttgagcatggaaaacccattgagcagcttttttacagccttcag
actctgcaaaaccaggatgatggtaatattgctgttctggagatgcttactgttctccct
gaagaagttgttgacactcaaaatacagatactagtattagtccagcccatagaagccag
tacggccaagagcttctctcacatactcctacggtgctcgagttcctactggatcaatct
caaaaaatgtatgatggtggtcttcaactgcatgaaaagaacagaaaagttctccgctgc
ttactcagttgggtacgagctgggtgcttctcagaaattccacaaggctcattgccaacg
catccacttctaaattttgtattcaactctttgcaggtttcagcttcatttgatgtggca
attgaagtgctagttgaacttgcaagtcgacatgaggggctacctcaggttttgttatgc
agagtacattttcttaaggaggcacttcttctaccagctctcagtaacagaaatgagaaa
tatatcagtggtcttgcttgcttgatgtcagaaattgggcaggctgcaccatctctaatt
gcggagggaggtgttgaggcacttgcactggcagatgcattattgagctgtgtggcattt
ccaagtgaagactgggagattgcagactcgacattgcagttttggtctactcttgcaagc
tatattcttggccttgatatggagagtgcaaaagatgggaaacatgtgaaagacgtgttt
ttttctgttttttcagcattgcttgatgctcttttattacgtgctcaggttgatgaatct
acatttaatgatgagagtggaatgcttgacatgcctgatggccttgttcaattcaggata
aatcttgctgaacttttggtggacatttgtcagcttttaagacctgcaacatttgtacaa
aagcttttctttgatcgctgggcatctgcaactgtaccggtaccttggaaagaggtggaa
gccaaattgtttgctcttaatgtggtatctgaagtagtcctccaggagggcccaaccttt
gacttttctgtgatcatgcagttggcaacaatgctgtctagtgggccttctgacaagctc
aagggatttacctgcaatgtatacagatcacttgcagatgttgttggatgctattccaag
tggatatctactttccaaactaatgctaggcctctactattatttcttgctgcagggatt
tcagagcctcagtgttcaaatgcttgtgcctctgccctgcgtaaattttgtgaagatgct
tctgctgtgatttgtgaaccctcaaatctggaaattttgatgtggattggtgaggctttt
gagaagactcgtttacctttggaagatgaggaagaagtagttagtgcaattagcgtcatc
cttggctctgttccaaacaaagagctaaagaacaacttgttggctagattgctttcctct
acctatgatgctataggaaaacttattgaagaagataatgatcattcttttagccaaaat
ccagctacatatacacaaattttgaactctgcggcgagagggttgcacaggataggaact
gtatttcgtcatcttgctacacctcagccaagtgtgcctggtgaagatgatactatattt
ggactactaaggattttttggcccatgttagagaaactatttaggtctgagcatatggag
agtagcaatttatctactgcagcttgtcgagctctttcactggcaattcagtcgtctggg
cagcactttgtaatgctattgcctaatgtactggattgcctttcaagtaattttctgtca
ttccaaagtcatgagtgttacattagaactgcttctgttgttatcgaagaattcagtaat
agagaggagtatggacccttgtttatcaaaacgtttgaaagatttacacaagcagcatca
gtaatgggtcttaattcttcatatatatgtgaccaagagccagatttagtggaggcctat
acaacttttgcatccacatttgttcgaagctctcgtaaggaggtgttagctgcatctggt
tcccttcttgaagtttcctttcaaaaggctgctatatgctgtacagctatgcatcgtgga
gcagcgctgggagcaatgtcgtatttgtcatgttttttggaagtgagcctggcatctttg
ttggaatctatgtctattcctgaaggatcatatggcgccataacaattcaggtcatatct
catagtggtgagggactagtatcaagtgtggtgtatgcactgcttggtgtttcagcaatg
tcacgggttcacaagtgtgcaacaatcttgcaacaattggctgccatttgcagtttcagc
gagagaacaacttggaaggctattctatgttgggaatctttacgtggttggctacatgca
gcggtgcaggctcttccagttgagtatctaaagcaaggggaagctgaaactcttgtgcca
atttggttggatgcccttgttggtgctgcctcagactatctcaagagtaggagttgcaga
agcggagaaaacaattatggccatatgcaaggaaaaggaggaagggttttgaagcgacta
gttcgagaatttgctgatagtcaccgcaatatcccatcctga

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