Manihot esculenta (cassava): 110613410
Help
Entry
110613410 CDS
T05761
Name
(RefSeq) OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 6 isoform X2
KO
K12655
OTU domain-containing protein 5 [EC:
3.4.19.12
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mesc01002
]
110613410
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110613410
Enzymes [BR:
mesc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
110613410
Peptidases and inhibitors [BR:
mesc01002
]
Cysteine peptidases
Family C85
110613410
Ubiquitin system [BR:
mesc04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
110613410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OTU
Peptidase_C65
UBA_9
CR_prot_dom_plant
Motif
Other DBs
NCBI-GeneID:
110613410
NCBI-ProteinID:
XP_021610201
LinkDB
All DBs
Position
4:complement(496595..502691)
Genome browser
AA seq
530 aa
AA seq
DB search
MTRILVQRGSGSSSSNQSRTGSSSAARQDTQVTATAPVVSAPEIVEEAQELLVVDELLEC
CGSSDNKASKSDELLVEGLHGGRNENSSDEIGDNEKLVNAECVGSGDMVKGLGGLRILER
TSAESEGACLDSPGIGGGSPQPPPPPVPPPKPLATNSNSNSRRFVSGSSNSMRIGSSRRA
VAWPVVSTRTSPSGSRPSSPRSHGDSEGYNSADEQNPCFVSSYDDLERERQFEIDIRRSK
GLEVKRMLEDGNCLFRAVADQVYGDSEVYDLIRQMCIDYMERERDHFSQFITEGFTSYCK
RKRRDKVYGNNAEIQALSEMYNRPIHIYSYGTEPINIFHRGYNTDTPPIRLSYHHGNHYN
SLVDPRRLTIGAGLGFSCLRGTNVDRDQVKAAIKAQQDQQIDNALIAEGRFYSDLELTEK
EIEHMVMEASRAEYLASDKSKQQLGHKESSTSGAEPSSSGARSSGSETKVREHNLQDTVL
SSSSMQMVLSMGFSYLQVMEAYSIFGDDVDSMVCYLLETGSSRRKGKAAE
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgactcggattttggttcaacgaggcagcggttcttcttcttcaaatcaaagccgaaca
gggtcctcttcagctgctcggcaggacacacaggtgacagctactgctccggttgtttca
gctcctgaaattgttgaggaggcacaggaacttttagttgttgatgagttattggagtgt
tgcgggagtagtgacaacaaggcatcaaaaagtgatgagcttttggtagaaggtttacat
ggtggtaggaatgagaattcgagtgatgaaattggggataatgagaaattggttaatgct
gagtgtgttggatcaggggacatggtaaaaggattgggtggtttgaggatattggagaga
acttcagcggagagtgaaggtgcatgccttgattctccagggattggcggtggaagtcca
caaccaccaccccctcctgtgccacctccaaagcctctggcaacaaattcaaattcaaac
tcgaggagatttgtatcaggaagttcaaattccatgcgaattggatcgtctagaagagca
gttgcttggcctgttgtttctactaggacttcaccatcagggtcccgcccttcctctcca
aggtctcatggtgatagcgaggggtataatagtgctgatgagcagaacccttgttttgtt
tcctcttatgatgatttggaaagagaacgtcagtttgagattgacataaggcggtctaaa
ggattagaagtaaaaagaatgttggaggatgggaattgtctcttccgagctgttgcagat
caagtgtatggagattctgaggtgtatgatttgattagacaaatgtgcatagattatatg
gaacgagagagggatcacttttctcagtttataaccgaaggctttacatcttactgtaag
aggaagagaagagataaggtctatgggaacaatgcggagattcaagctttatcggaaatg
tataaccggccaattcatatttattcttatggcacagaacctatcaacatatttcataga
ggctacaacactgatacaccacccataaggctaagctatcatcatggtaaccattacaac
tctcttgttgacccacgtcgactgacaattggtgcaggacttggtttcagctgtcttcga
gggacaaacgtggatagggatcaggtgaaggctgcaattaaagctcaacaggatcagcag
atagataatgcccttatagcagaagggaggttttactcggatcttgagcttactgagaag
gagattgaacatatggtgatggaggcttctagagctgagtaccttgccagtgacaaatct
aagcagcaacttggtcacaaagaatcttctacatctggtgctgaaccatcatcttcagga
gctagatcatcaggcagtgagaccaaggtgagagaacataatttgcaggatactgttctc
agcagtagtagtatgcagatggttctgtccatgggattcagctacctccaagtgatggag
gcatacagcatatttggtgatgatgtggattcaatggtctgttacttgctggaaactggc
agtagtcggcgcaaaggcaaagcagccgaatga
DBGET
integrated database retrieval system
