Manihot esculenta (cassava): 110613411
Help
Entry
110613411 CDS
T05761
Name
(RefSeq) DNA-directed RNA polymerase III subunit 2
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110613411
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesc03021
]
110613411
Enzymes [BR:
mesc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
110613411
Transcription machinery [BR:
mesc03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
110613411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
FtrD-like
Motif
Other DBs
NCBI-GeneID:
110613411
NCBI-ProteinID:
XP_021610202
LinkDB
All DBs
Position
4:35074362..35095639
Genome browser
AA seq
1152 aa
AA seq
DB search
MGLMQADHSTGNQEPNVGEFIDKQKLTAPIKSAVDKFALLPEFLKVRGLVKQHLDSFNYF
VNIGIKKIVRANDRIVSTVDPGIYLRFKDVRIGTPSVMVDTISEQLSPHMCRLSDMTYAA
PIMVNVEYIQGSHDQKTRVEKNDVVIGRMPIMLRSRSCVLYGKDEAELARLGECPLDPGG
YFVIKGTEKVILIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIQMEKEKIYLCL
NQFAKKIPIMVVIKAMGMESDQEVVQMLGRDPRYGALLLPSIEECSGLNIYTQQKALEYL
EGKVKMSTYASYSSGKENRALGILRDVFVANVPVHKNNFRPKCIYVAVMLRRMMEAMLNK
DALDDKDYVGNKRLELSGQLISLLFEDLFKTMITEVQRTIDNVLTKQNRSSRFDLSQYLV
RDSITNGLERTLSTGNFDVKRFKMHRKGMTQVLVRLSFIASLGHMTRVSPQFEKSRKVSG
PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEGPLISLCYCLGVEDLELLS
GEELHSPNSFLVIFNGLILGKHRRPQHFATAMRKLRRAGKVGEFVSVFVNEKQCTVYIAS
DGGRVCRPLVIADKGVSRIKEHHMKELLDGVRTFDDFIREGLIEYLDVNEENNSLIALYE
AEATAETTHIEIEPFTILGVIAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRMDS
LLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFG
RCIVMKKYSDTINYKYENGAADRILRPPRTEERERVLDDDGLAAPGEIIRPGDIYINKES
PVETRGQLKSAAALADIKYRPNRSTFKGPEGESCVVDRVALSSDRNNNLSIKFIIRHTRR
PELGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGK
AGVSCGRFHYGSAFGEPSGHADTVEAISETLVNHRFSYNGKDFIYSGITGCPLQAYIFMG
PIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLLY
ERLMLSSDPFEVQVCRVCGLLGYYNQKLRTGICSTCKNGDNISTMKLPYACKLLIQELQS
MNVVPRLKLAEA
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcatgcaggcagaccattctactggaaaccaggagccaaacgtgggtgagttc
attgataagcaaaagcttactgctcccatcaaatctgctgttgataaattcgcgcttctt
cccgagtttttgaaggtgagaggtctcgtgaagcagcatttggactcgtttaattatttt
gtgaacattggtataaagaagattgtgcgtgccaatgatcgcattgtatccactgttgat
ccgggcatttatctcaggtttaaagatgttaggattggtacaccttcagtgatggtggac
actatcagtgaacagcttagccctcatatgtgccggttatctgatatgacttatgctgcg
ccaataatggtcaatgtagagtatattcaaggaagtcatgatcaaaagaccagagtggaa
aagaatgatgttgttattgggagaatgcctatcatgttaaggagtcgcagttgtgtatta
tatggaaaagatgaagcagaacttgcaagacttggtgagtgccccctagatcctggagga
tattttgttataaaagggacagaaaaggtgattttaattcaagagcaactttcaaagaat
agaataattattgatactgataagaagggaaatataaatgcatctgttacaagcagcaca
gaggcaacaaaaagcaaaacagtcattcagatggagaaggagaagatttatttatgtctc
aatcaatttgcaaagaagattcctattatggtggtaatcaaggctatgggcatggagagt
gatcaagaggttgtacagatgttgggaagagatcctcgatatggtgccctactcttgcca
tctattgaggaatgctcaggtctgaatatatacacgcaacaaaaagccttggagtacctt
gaaggaaaggtgaagatgtctacatatgccagttattcatctggaaaggaaaatagagct
ttgggtatacttcgagatgtgtttgttgctaatgttccggtacataaaaataattttcgt
ccaaaatgtatatatgttgcggtaatgttgcggaggatgatggaggctatgttaaacaag
gatgcactggatgataaggattatgtgggtaacaagcgattggagctatctggccagtta
atttctctgctttttgaggatctgtttaagactatgatcactgaggttcagaggacaatt
gataatgtgttaacaaagcaaaaccggtccagtcggtttgacctttcccaatatttagtc
agagatagtattactaatgggctagaaaggaccctttctactggaaactttgatgtcaaa
cggtttaagatgcacaggaagggcatgacacaggtgttagttagattatcctttattgca
tctttgggccacatgacaagagtttcaccacaatttgagaagtccaggaaagtaagtgga
cctagagcattgcaaccaagtcagtggggcatgctttgcccttgtgatactccagaaggt
gaagcttgtggactagtaaagaacttggccctaatgactcatgttacaactgatgaagaa
gagggtccattaatttctttgtgctattgtttgggtgttgaagacttggaacttctctct
ggagaagagcttcactcaccaaattcttttctggttatatttaacgggctgattcttggc
aagcacaggaggccacagcattttgctactgcaatgaggaagctccgaagagctggcaaa
gttggcgagtttgtgagcgtctttgtgaatgagaagcagtgtactgtctacattgcttct
gatggaggtcgggtttgtcgtcctctagttattgcagacaaaggtgtatcaagaattaaa
gagcatcatatgaaagagttgctggatggtgtccgtacttttgatgacttcatacgcgag
ggattgattgaatatcttgatgtcaatgaggagaacaattctctgatagctctttatgaa
gcagaggccacagcagagacaacccatattgagatagaacctttcactatattaggtgtt
attgctggcttaataccatttcctcatcataatcagtcaccgagaaacacatatcagtgt
gctatggggaagcaagctatgggaaacattgcatacaaccagttatttcggatggactcg
ttactttatctgttggtgtatcctcaacggcctctattgacaacaaggacaattgaactg
gttggttatgataagcttggggctggtcagaatgcaactgttgctgtgatgagttacagt
ggctatgacatagaggacgcaatagtcatgaacaaggcatccttggatcgtggttttggg
cgttgtattgttatgaaaaagtattccgacaccatcaattataagtatgaaaatggtgcg
gcagatagaattttaaggccaccaaggacagaagaaagggagagggtgttggatgatgat
ggacttgctgcacctggggaaattattagaccgggggatatctacatcaataaggaatcc
cctgtggaaacaagggggcagttaaaatctgctgcagcattagcagacatcaaatatcgg
cctaatagaagtacatttaagggtcctgaaggagagtcatgcgtggttgatagagttgct
cttagttcagataggaataacaatctatctatcaaattcataattcgccatactcgtaga
ccagagctcggcgacaaatttagtagcagacatggtcagaaaggtgtttgtggaacaatt
gttcaacaggaggatttccctttttctgaacgtggcatctgccctgatttaattatgaat
cctcatggatttccaagtcgaatgactgttggaaagatgatagaacttcttgggggtaaa
gctggggtttcatgtggtagatttcattatggtagtgcttttggagaaccaagtggtcat
gcggacacggttgaagctataagtgaaacccttgttaatcatcgctttagctacaatggc
aaggacttcatttattcaggcattacaggttgtccactacaagcatatatttttatgggg
ccaatttactaccagaagctgaaacatatggtcttagacaagatgcacgctcgaggtagt
ggacctcgtgtcatgttaactagacaacctacggaaggaagagctcggaatggaggactt
cgagtaggagaaatggaacgtgattgtttgattgcttatggtgctagcatgttactttat
gagcgcctaatgctttctagtgatccttttgaagtgcaggtttgtagagtttgtggtttg
ttgggttattacaaccagaaactgagaactgggatttgttctacttgtaaaaatggggat
aatatttctactatgaaactgccatatgcgtgcaagctcttaattcaggaactccagtca
atgaatgttgttcctcgtttaaaactggcagaggcatga
DBGET
integrated database retrieval system
