Manihot esculenta (cassava): 110613454
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Entry
110613454 CDS
T05761
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3
KO
K03265
peptide chain release factor subunit 1
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110613454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110613454
03012 Translation factors [BR:
mesc03012
]
110613454
Messenger RNA biogenesis [BR:
mesc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
110613454
Translation factors [BR:
mesc03012
]
Eukaryotic type
Release factors
110613454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
She2p
BMT5-like
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
110613454
NCBI-ProteinID:
XP_021610285
LinkDB
All DBs
Position
4:30156633..30160610
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AA seq
437 aa
AA seq
DB search
MADGQESDKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN
IKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTVVTEDGKEKKVTIDFEPFKPIN
ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQS
DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTG
KYVFGVDDTLKALEMGAVETLIVWENLDINRYALKNSVTGEIIIKHLNKEQEADQSNFRD
SASSAELEVQEKMPLLEWFANEYKRFGCSLEFVTNKSQEGSQFCRGFGGIGGILRYQLDI
RSFDELSDDGAVYEDSD
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcagatggtcaggaatcagataagaatattgaaatatggaaaatcaaaaagttgatc
aaggcattggagtcagcgaggggtaatggtacgagcatgatatctcttataatgcctcct
cgtgatcaaatatctcgggtcacaaagatgctgggtgatgaatttggaactgcttcaaac
attaaaagtagggtcaaccggcagtctgtcttggctgccattacatctgctcaacagagg
ttgaagctgtataacaaggttcctcccaatgggctggtgctttatacaggaacagttgtt
actgaagatgggaaggaaaagaaggtgacaattgattttgagcctttcaagcctataaat
gcatcgctttacctttgtgacaacaagttccacacagaagcacttaacgaactcttagaa
tctgatgacaagtttggttttattgtcatggatggaaacggcaccctgtttggaacatta
agtggtaacacacgagaagtgcttcataaattcactgttgatctaccgaagaagcatgga
agaggagggcagtctgcacttcgttttgctcgccttcggatggaaaaacgacacaactat
gtcaggaaaactgcagagcttgccacacagttcttcattaatcctgcgaccagtcagcca
aatgtttctgggctgatattggctggttcagctgacttcaagactgaattgagccagtca
gatatgttcgatcctcgtttgcaagcaaagatattgaatgtggttgatgtttcttatggg
ggagagaacggtttcaaccaagctattgagctgtcagctgaaattctatcaaatgtaaaa
ttcatacaggaaaaacgcctgattgggaaatactttgaggagatcagccaagacactgga
aagtatgtctttggtgttgatgacacgctgaaggctctagaaatgggtgctgttgaaacc
cttattgtgtgggaaaatctagatattaatcgctatgctcttaaaaacagtgttactggt
gaaataattataaagcacttgaacaaggagcaagaggctgatcagagtaacttcagggat
tcggccagctctgctgagttggaggttcaggaaaagatgcctttgctggagtggtttgcc
aatgaatacaagcgttttggttgttcgcttgaatttgttacaaacaaatctcaagaggga
tcacagttttgcagaggatttggtggaattgggggtattctccgctaccagctcgacatt
agatcttttgatgagttgtctgatgatggagcagtttatgaggattctgattaa
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