Manihot esculenta (cassava): 110613462
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Entry
110613462 CDS
T05761
Name
(RefSeq) long chain acyl-CoA synthetase 1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00061
Fatty acid biosynthesis
mesc00071
Fatty acid degradation
mesc01100
Metabolic pathways
mesc01212
Fatty acid metabolism
mesc04146
Peroxisome
Module
mesc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
110613462
00071 Fatty acid degradation
110613462
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
110613462
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mesc01004
]
110613462
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mesc04147
]
110613462
Enzymes [BR:
mesc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
110613462
Lipid biosynthesis proteins [BR:
mesc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
110613462
Exosome [BR:
mesc04147
]
Exosomal proteins
Exosomal proteins of breast milk
110613462
Exosomal proteins of breast cancer cells
110613462
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
110613462
NCBI-ProteinID:
XP_021610302
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Position
1:complement(39512855..39517028)
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AA seq
662 aa
AA seq
DB search
MKTFLAQVEEGKEGKDGNPSVGPVYRNVLSKDGFPPLDSDMITAWDIFSVSVKKHPGNKM
LGWRNFVDGKVGPYVWKTYKEVYEEVLQIGSALRANGAKTGCRVGIYGANCPQWIVAMEA
CSGHSLVCVPLYDTLGPRAVNFIIDHAEIDFVFIQDKKVKELLNPDCESASRLKVIVCFT
SLTEEEKDKAAQMQIKAYSWEEFLYLGKENPSEIVPPQPLNICTIMYTSGTSGDPKGVVL
THETISNFVRGVDLFLEQMEDKMTADDVYLSFLPLAHILDRVTEEYCFRKGASVGYYHGD
LNALRDDLMELKPTFLAGVPRVFEKIHEGIKKALEELNPVRRRIFEALYKYKLAWLNRGY
KQKYASPLADLLAFRKVKAKLGGRIRLIVSGGAPLSPEVEEFLRVTTCAFMLQGYGLTET
CGPITISFPDEMCMMGSVGSLGLYNEIRLEEVPEMGYNPLGNPSCGEICVRGQTLFSEYY
KNPELTRASIKDGWFHTGDIGEILPIGVLKIIDRRKNLVKLSQGEYVAIEYLENVYGITP
IVEDIWVYGDSFKSMLVAVVVLHEENTKQWAAFNGHTGSFHELCSLDQLQQHVLAELKST
AQKNKLRGFEYIKGVILESRPFDMERDLVTATLKKKRNKLLNYYQGDIDELYRKLAVRRA
QS
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgaagactttcttagctcaggtcgaggaaggaaaggaaggaaaagatgggaatccttcc
gttggtcctgtttatcgtaacgtactatcaaaagatggatttcctccacttgattctgat
atgatcactgcatgggatattttcagcgtatctgtaaagaagcatcctggaaataagatg
cttggttggcgtaactttgtagatgggaaggtgggaccttatgtctggaagacttacaag
gaagtgtatgaagaagttttgcagattggttctgcattaagagcaaatggagctaaaact
ggatgccgtgttggaatttacggagcaaattgtcctcaatggattgtggctatggaggct
tgcagtggccacagcttggtttgtgtgcctctttatgatacacttggtcctcgtgctgtc
aattttattatagaccatgcagagatcgattttgttttcatccaagataaaaaagtgaaa
gaattgttgaacccagattgtgaatctgcttcacggcttaaagtgattgtttgcttcact
tcattaacagaggaagagaaggacaaagcagctcaaatgcagataaaagcatactcatgg
gaagagtttctatacttggggaaagagaatccatcagaaatagtgccacctcagcctctc
aacatttgcacaataatgtatacaagcggcaccagtggagatcccaaaggtgttgtctta
acacatgaaacaatatccaattttgtcagaggagttgatctatttttggagcaaatggaa
gacaagatgacagctgatgatgtgtatctatctttcctgccccttgcacatatacttgat
cgtgtgactgaggaatactgtttccgaaaaggtgcttctgtcggctactatcatggggat
ttgaatgcactgagagatgacctgatggagttgaagccaacatttttagctggtgtacct
cgtgtctttgaaaaaatacacgaaggtataaaaaaggcactagaagaactgaatcctgta
aggcggcgaatcttcgaagctctgtataaatacaaacttgcttggctgaataggggttac
aagcagaaatatgcttcaccattggcagatttgttagccttcaggaaggtgaaagctaaa
ttaggcggtcgtattcgattaattgtgtctggtggtgcacctttaagtcctgaagtggaa
gaattcttacgggttactacttgtgctttcatgcttcaaggctatgggttgacagaaacc
tgtggaccaatcaccattagctttccagatgaaatgtgcatgatgggttctgttggatct
ctgggtttatataatgagatccgactggaggaggttccagagatgggctacaatccgctt
gggaatccatcatgtggtgagatatgcgtgagaggacagactctgttttccgagtactac
aagaatcctgaactgacaagagcttccattaaagatggctggtttcatacaggggacata
ggtgagattcttccaattggagttctgaagattatagacaggaggaaaaatcttgtaaaa
ctttcccaaggagaatacgttgcaattgagtacctggaaaatgtttacgggatcactcca
attgttgaagatatatgggtctatggagacagcttcaagtcgatgctagttgcagtagta
gtgctccatgaagaaaacactaaacaatgggcagctttcaatggtcacactggttcattc
catgaactctgttctcttgatcagctacagcaacatgtgcttgcagaactgaagtctaca
gctcagaagaacaagctgagaggttttgaatatattaaaggagtgattttggaatctcgc
ccctttgacatggaaagagatttggtgactgcaacattgaagaagaaaagaaataaattg
ctcaactattatcagggggacatcgatgaactttacagaaaactggctgtcagaagagca
caatcatga
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