Manihot esculenta (cassava): 110613493
Help
Entry
110613493 CDS
T05761
Name
(RefSeq) pleiotropic drug resistance protein 1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
110613493
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mesc02000
]
110613493
Transporters [BR:
mesc02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
110613493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_16
AAA_29
AAA
AAA_28
AAA_33
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
110613493
NCBI-ProteinID:
XP_021610343
LinkDB
All DBs
Position
4:31070158..31077727
Genome browser
AA seq
1436 aa
AA seq
DB search
MEGDHYRASNSLRRGSSSVWRNNGLDVFSRSSREEDDEEALKWAALEKLPTYDRLRKGIL
VSVSKGGANEIDVDNLGFQERKTLLERLVKVAEEDNEKFLLKLKNRIDRVGIEVPTIEVR
YEHLNVEAEALVGSNALPSFLNFSFSLVEGLFRYILPNRKRPLTILKDVSGVIKPSRMTL
LLGPPSSGKTSLLLALAGKLDPSLKVSGTVTYNGHSLNEFIPQRTAAYISQHDLHIGEMT
VRETLAFSARCQGVGTQHEMLAELSRREKAANIKPDPDLDVFMKAAATEGQETSVVTDYV
LKILGLDICADTLVGNEMIRGISGGQRKRVTTGEMLVGPAKALFMDEISTGLDSSTTFSI
VNSLKQSIHILNGTAVISLLQPAPETYNLFDDIILISDGQIVYQGPRENVLEFFEYMGFK
CPERKGVADFLQEVTSKKDQQQYWARKDQPYRFVTVNEFAEAFQSYEVGRKIAEDLSVPF
DRTKNHPAALTTKPYGVGKMELIKANFSREYLLMKRNSFVYVFKLTQLIVMAIIGMTLFF
RTEMKHDSFEDAGVYAGALFFTLITIMFNGMAELSMTIAKLPVFYKQRNLLFFPAWSYAI
PSWILKIPVTFLEVGVWVFITYYVIGFDPNVGRLFKQYMLLLLVNQMASGLFRFIASVGR
NMIVANTFGSFALLTLFALGGFVLKRSDIKKWWIWGYWVSPLMYGQNAIVANEFLGNSWN
HIPANSTSTDSLGVQFLKTNGFFPHAYWYWLGVGASAGYILVFNLLYTVALTFLDQFEKP
QAVISDEPEESNRSGGAIQLSQAESSHRTQTESGTSGIDESNHNKKKGMVLPFEPHSITF
DNVIYSVDMPQEMKSQGVVEDKLVLLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK
TGGYIEGDIRISGYPKKQETFARISGYCEQNDIHSPYVTVYESLVYSAWLRLPPDVDSET
RRMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL
DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGEEIYVGPLGRHSC
HLIKYFEGIGGVSKITDGYNPATWMLEVSSSAQELTLGVDFANVYRNSDLYRRNKAMIQE
LSKPAPGTEDLYFPTQYSQPFLTQCMACLWKQSWSYWRNPPYTGVRFWFTTFIALMFGTI
FWDLGSKMEKEGDLTNAMGSMYAAVLFLGVQNSSSVQPVVAVERTVFYREKAAGMYSAMP
YAYAQALIELPYIFAQAGVYSLITYAMIGFEWTAAKFFWYLFFLYFTLLYFTFYGMMTVA
VTPNHHIASIVSSAFYSIWNLFSGFIVPRPKMPVWWRWYYWGCPISWTLYGLFASQFADI
TKPLGTTGKTVEEYVNETYGIKHDFLGASAGVIFGIALLFAVIFAVSIKAFNFQRR
NT seq
4311 nt
NT seq
+upstream
nt +downstream
nt
atggagggtgatcactacagagcaagtaatagtttacgaagaggaagctcttctgtgtgg
agaaacaatggattggatgttttttcaagatcttcacgagaagaagacgatgaggaggct
ctaaaatgggctgcacttgagaaattacctacctatgatcgtctgaggaaaggtatattg
gttagtgtatccaaaggtggagctaatgagatcgatgtagacaaccttggatttcaagaa
aggaaaactttgttagagaggttggtcaaagttgcagaagaggataatgagaagttcttg
ttgaagcttaagaaccgtattgacagggttggaattgaagttccaacaattgaagtccgg
tatgagcatctaaatgttgaagcagaagctttggtaggaagtaatgctttgccttcgttc
cttaacttctcgtttagtcttgtagagggtttgttccgttatatccttccaaatagaaag
agaccattgaccatcctgaaggatgttagtggagtcatcaagccatcaagaatgactttg
cttttgggtcctccaagctctggaaagacctctctcttgttggcactggctgggaagctt
gatccgagtctaaaggtttctggtactgtgacttacaatggccattcattgaatgagttc
ataccccagagaacagctgcctatatcagtcaacatgatctccatataggagaaatgact
gtaagggagaccttggcattttcagccagatgccaaggagttggaacccaacatgaaatg
ttagcagaattgtctagaagagaaaaagcagcaaacattaagcctgatcccgatcttgac
gtctttatgaaggcagcagcaacagaaggtcaggagaccagtgtcgtcacagattatgtt
ttaaagatattaggattggatatctgtgccgatactctggtaggaaatgaaatgataagg
ggtatctctggaggacaaaggaagcgtgttacaacaggtgaaatgctggttggaccagct
aaggcattgttcatggatgagatttctactggcttggacagctcaacaactttctcaatt
gttaattcactaaagcaatccatccacattctaaatggaactgctgtcatatccctcctt
cagccagcaccagagacttataacctcttcgatgatattattctgatctcagatggccag
attgtgtatcagggtcctcgagagaatgtgcttgagttttttgaatatatgggcttcaag
tgtcctgaaagaaaaggagttgctgacttcttgcaagaggtgacatcaaagaaagatcag
cagcagtactgggcacgcaaagatcaaccttacaggtttgtcacggtgaacgaatttgct
gaggcattccaatcatatgaagtgggaagaaaaattgcagaagatctttcagttccattt
gataggaccaagaaccacccagctgctttgacaaccaaaccctacggtgttggaaagatg
gagctgattaaagcaaacttctcaagagaatacttgcttatgaaaaggaattcgtttgtg
tatgtcttcaaactcacacaacttatagtgatggcaatcattggtatgacactcttcttt
aggaccgagatgaaacatgatagttttgaagatgcaggagtttatgcgggtgctttgttc
ttcaccctgatcacgatcatgtttaatggtatggcagagctatccatgaccattgctaag
cttcctgtattctacaagcaaaggaacctcctattctttcctgcatggtcatatgcaatt
ccttcatggatccttaaaattcctgtcacatttttggaagttggtgtttgggtgttcatc
acttattacgtcattggatttgatcctaatgttggaaggctatttaagcagtatatgctg
cttttacttgtgaaccagatggcctctggtcttttccggtttattgcttcagttggaaga
aacatgattgttgctaatacatttggttcatttgcactccttacactttttgcattgggt
ggctttgtcctcaaacgatcggacataaagaaatggtggatctggggttactgggtatcc
ccactgatgtatgggcagaatgcaattgttgctaacgagtttcttgggaacagttggaat
catattccagcaaactcaacctcaacagattctctaggagttcaatttttgaaaactaac
gggttcttcccgcatgcatattggtattggttaggagtaggggcatcagctggatatata
ctagtcttcaatttactctatactgtggctcttactttcttagaccaatttgagaagcct
caggctgttatatctgatgagcctgaagaaagtaacagaagtggaggagccattcagtta
tcacaagctgaaagcagtcacagaacccagacagagagtgggacaagtggaattgatgaa
tcaaaccataacaagaaaaaaggaatggttcttccatttgaaccacattctatcactttt
gataatgttatatactctgtcgatatgccccaggaaatgaaaagtcagggagttgttgag
gacaagttggtgcttttgaagggcgtgagtggtgctttcaggccaggtgttctcacagcc
ttaatgggtgttagtggtgctggtaaaaccactctgatggacgtgctggctggcagaaaa
actggcggatatatcgagggggatatcagaatttctggttatcccaagaagcaagaaacc
tttgctagaatttcaggatactgtgagcaaaatgacatccactctccgtatgttactgtc
tatgaatccttagtctactctgcttggcttcgtctaccccctgatgtcgactctgaaacc
agaaggatgttcgttgaagaagtcatggagcttgtggagctgaatccattgaggcaagca
ctcgttgggttgcctggtgtgaatggtttgtctactgagcagcgaaagcggctaaccatt
gcagttgagctagtggcaaacccctctataatattcatggatgagccaacttcagggcta
gatgcaagagctgctgcaattgtaatgagaacagttaggaacactgtggacacaggaaga
actgttgtgtgcacaatccatcagccaagcattgacatatttgaagcttttgatgagtta
ttcttgatgaagagaggaggagaagagatatatgtcgggccattgggtcgccattcctgt
catctgattaaatattttgagggaattggaggagtcagtaaaattacagatggttacaat
ccagcaacttggatgttggaagtttccagctctgcacaagagttaactttgggggttgat
tttgcaaacgtttacaggaattcagatctttacaggagaaacaaagcaatgattcaggaa
ttaagcaagcctgctcctggtacagaggatctctatttccctacacaatactcgcaaccc
tttttgacccaatgtatggcttgcttatggaagcagtcatggtcatattggaggaatcca
ccatatacaggcgtaagattttggttcacgacctttattgccttgatgtttgggacgatt
ttctgggaccttggctccaaaatggaaaaggaaggagatcttaccaatgcaatgggttca
atgtatgcagctgttcttttccttggggtgcaaaattcatcatctgtacagccggtagtt
gctgttgaaagaaccgtcttttatagagagaaagctgccggaatgtattctgccatgccc
tatgcatatgcacaggccttgattgagcttccctatatttttgctcaagctggagtctac
agtcttataacatatgcaatgattgggtttgaatggactgctgccaagttcttctggtat
ctattcttcttgtacttcacattattatacttcaccttctatggaatgatgactgtcgcc
gtgacgccaaaccaccacattgcatccatagtatcatcagcattctactcaatatggaat
ctattttcaggattcattgttccaaggcctaaaatgcctgtgtggtggagatggtactac
tggggatgtccaatatcatggaccttgtatggattatttgcatcccagtttgctgatata
acaaaaccactggggactactggtaaaacagtggaggaatatgtaaatgaaacttatggt
attaagcatgattttctaggagcatctgctggtgttatttttggaatcgccttgctcttt
gcagtcatttttgccgtttccatcaaggccttcaatttccagaggcggtag
DBGET
integrated database retrieval system
