Manihot esculenta (cassava): 110613531
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Entry
110613531 CDS
T05761
Name
(RefSeq) ABC transporter E family member 2 isoform X1
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mesc03009
]
110613531
Ribosome biogenesis [BR:
mesc03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
110613531
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
SMC_N
AAA_21
Fer4
AAA_15
AAA_22
Fer4_6
AAA
RsgA_GTPase
AAA_29
AAA_23
Rad17
NACHT
Fer4_2
NPHP3_N
Fer4_21
LdpA_Fe-S-bd
nSTAND3
TsaE
SRP54
Fer4_10
AAA_33
AAA_28
AAA_5
Fer4_9
ORC-CDC6-like
Fer4_4
Fer4_16
AAA_7
T2SSE
Fer4_7
Fer4_8
Fer4_17
Mg_chelatase
UDG-inhib_P56
Motif
Other DBs
NCBI-GeneID:
110613531
NCBI-ProteinID:
XP_021610399
LinkDB
All DBs
Position
4:complement(27899014..27905892)
Genome browser
AA seq
605 aa
AA seq
DB search
MADRLTRIAIVSSDRCKPKKCRQECKKSCPVVKTGKLCIEVTPASKIAFISEELCIGCGI
CVKKCPFEAIQIINLPKDLDKDTTHRYGPNTFKLHRLPVPRPGQVLGLVGTNGIGKSTAL
KVLAGKLKPNLGRFNNPPDWQEILTYFRGSELQNYFTRILEDNLKAIIKPQYVDHIPKAV
QGNVGQVLDQKDEREMKAELCHDLELNQVIDRNVGDLSGGELQRFAIAVVAIQNAEIYMF
DEPSSYLDVKQRLKAAQVIRSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGVVT
LPFSVREGINIFLAGFVPTENLRFRDESLTFKVAETPQESAEEIETYARYKYPTMTKTQG
NFRLRVIEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDTVEDSDVEIPEFNVSYKPQ
KISPKFQSTVRHLLHQKIRDSYTHPQFVSDVMKPLLIEQLMDQEVVNLSGGELQRVALCL
CLGKPADIYLIDEPSAYLDSEQRIVASKVIKRFILHAKKTAFVVEHDFIMATYLADRVIV
YEGRPSIDCTANSPQSLLTGMNLFLSHLDITFRRDPTNYRPRINKLDSTKDREQKSAGSY
YYLDD
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaggttgacgcgtatagcaattgtgagctcagacagatgcaagcccaagaag
tgccgtcaagaatgcaaaaagagttgccctgtcgtcaaaactgggaaattatgtattgag
gttactcctgcatctaagatagcttttatctctgaggagttgtgcattgggtgtggtatt
tgtgttaagaaatgcccatttgaagcaattcagatcatcaacttgccaaaggatttggat
aaagatacaacgcaccgttatgggcctaacacctttaaattgcacaggttaccagtccct
aggcctgggcaagttcttggattagttggaacaaatggcattggaaagtccactgccctc
aaagttttggctggaaaactgaaaccaaatttgggtcgcttcaataatcctccagattgg
caggaaatcttgacctattttcgaggatctgaattgcagaactactttacccgtatcctg
gaagataatttgaaggccatcataaagcctcagtatgttgaccatattccaaaagcagtc
caaggcaatgtagggcaggtgcttgaccaaaaagatgagagagagatgaaagcagaactt
tgtcatgatcttgagctgaaccaggttatagatcgtaatgtgggggatctgtctggtggg
gagctccagcgttttgctattgctgttgttgcaatacagaatgcagagatatatatgttt
gacgaaccttcgagttatcttgacgtcaaacagaggcttaaagctgcccaagttatcaga
tctttgctcaggcctaatagctatgttattgtggtggagcatgaccttagtgtcctcgat
tatttatcagactttatttgctgcttatatgggaaacctggtgcatatggagttgtaact
cttcccttctctgttagagaaggaattaatatattcttggctggatttgttcctacagaa
aatcttcgattccgggatgagtcattaaccttcaaggttgctgagactccacaagagagt
gctgaggagatagaaacatatgcacgttacaaatatccaaccatgactaaaactcagggc
aacttcaggcttcgtgtgattgagggtgaatttacagattctcagataattgttatgctg
ggcgagaatgggacggggaagacaacatttattcgtatgctggctggcctattgaaacct
gatactgtagaagattctgatgtggagatacctgagtttaatgtttcttacaagccccag
aagatcagtcctaagttccaatctactgttagacacttgctacatcaaaaaattcgtgat
tcttatacacatcctcagtttgtgtcagatgtcatgaaaccactgcttatagaacaacta
atggatcaagaagtagtgaatctatctggtggagagttgcaaagagttgctttatgcctc
tgtcttgggaagcctgcagacatttatctgatagatgaaccaagtgcttatctagattct
gagcagcgtattgttgcttcaaaagtcataaagaggtttatccttcacgcgaagaaaact
gcattcgtggtagagcatgattttataatggcaacttacctggctgatagagttattgta
tatgagggaaggccatctatagattgtacagcaaattcgcctcagtccttgttgactgga
atgaatctcttcttatcacatctagatatcacttttaggcgggacccaaccaattatcga
ccaagaatcaacaagttagactctaccaaggatagagagcagaagtctgctgggtcatat
tattacctggatgattga
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