Manihot esculenta (cassava): 110613583
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Entry
110613583 CDS
T05761
Name
(RefSeq) ABC transporter E family member 2 isoform X1
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mesc03009
]
110613583
Ribosome biogenesis [BR:
mesc03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
110613583
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_21
Fer4
AAA_15
Fer4_21
AAA_22
Fer4_6
RsgA_GTPase
AAA
AAA_29
AAA_23
Rad17
Fer4_2
LdpA_Fe-S-bd
NACHT
Fer4_9
NPHP3_N
Fer4_10
nSTAND3
TsaE
SRP54
Fer4_7
Fer4_4
AAA_33
Fer4_16
ORC-CDC6-like
AAA_5
Fer4_8
AAA_7
Fer4_3
Fer4_17
T2SSE
Fer4_22
UDG-inhib_P56
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
110613583
NCBI-ProteinID:
XP_021610484
LinkDB
All DBs
Position
4:complement(27887110..27896281)
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AA seq
607 aa
AA seq
DB search
MNWNDLCEEWISLYPFCPLLGVCWISKSRDHCHPSLGKLCIEVTPASKIAFISEELCIGC
GICVKKCPFEAIQIINLPKDLDKDTTHRYGPNTFKLHRLPVPRPGQVLGLVGTNGIGKST
ALKVLAGKLKPNLGRFNNPPDWQEILTYFRGSELQNYFTRILEDNLKAIIKPQYVDHIPK
AVQGNVGQVLDQKDEREMKAELCDDLELNQVIDRNVGDLSGGELQRFAIAVVAIQNAEIY
MFDEPSSYLDVKQRLKAAQVIRSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGV
VTLPFSVREGINIFLAGFVPTENLRFRDESLTFKVAETPQESAEEIETYARYKYPTMTKT
QGNFKLRVIEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDTIEDSDVEIPEFNVSYK
PQKISPKFQSTVRHLLHQKIRDSYTHPQFVSDVMKPLLIEQLMDQEVVNLSGGELQRVAL
CLCLGKPADIYLIDEPSAYLDSEQRIVASKVIKRFILHAKKTAFVVEHDFIMATYLADRV
IVYEGRPSVDCTANSPQSLLTGMNLFLSHLDITFRRDPTNYRPRINKLDSTKDREQKSAG
SYYYLDD
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgaattggaatgatttgtgcgaggagtggatctcactttatccattctgccccttgctt
ggtgtatgttggatctcaaagagtagagatcactgtcatccttctcttgggaaattatgt
attgaggttactcctgcatctaagatagcttttatctctgaggagttgtgcattgggtgt
ggtatttgtgttaagaaatgcccatttgaagcaattcagattatcaatttgccaaaggat
ttggataaagatacaactcaccgttatggtcctaacacctttaaattgcacaggttacca
gttcctaggcctgggcaagttcttggattagttggaacaaatggcattggcaagtcaact
gccctcaaagttttggctggaaaactgaaaccaaatttgggtcgtttcaataatcctcca
gattggcaggaaatcttaacctactttcgaggatctgaattgcaaaattattttacccgt
atcctggaagataatttgaaggccatcataaagcctcagtatgttgaccacattccaaaa
gcagtccaaggtaatgtagggcaggtgctcgaccaaaaagatgagagagagatgaaagca
gaactctgtgatgatcttgagctgaaccaggttatagatcgtaatgtgggggatctgtct
ggtggggagctccagcgttttgctattgctgtcgttgcaatacagaatgcagagatatat
atgtttgacgaaccttcaagttatcttgatgtcaaacagaggcttaaagctgcccaagtt
atcagatctttgctcaggcctaatagctatgttattgtggtggagcatgaccttagtgtc
ctcgattatttatcagacttcatttgctgcttatatgggaaaccgggtgcatatggagtt
gtaacccttcccttctctgtcagggaagggattaatatattcttggctggatttgttccc
acagaaaatcttcgattccgggatgagtcattaaccttcaaggttgctgagactccgcaa
gagagtgctgaggagatagaaacatatgcacgctacaaatatccaaccatgactaaaact
cagggcaacttcaagcttcgtgtgattgagggtgaatttacagattctcagataattgtt
atgctgggcgagaatgggacggggaagacaacatttattcgtatgctggctggcttattg
aaacctgatactatagaagattctgatgtggagatacctgagtttaatgtttcttacaag
ccccagaagatcagtcctaagttccaatctactgttagacatttgctacatcaaaaaatt
cgtgattcttatacacatcctcagtttgtatcagatgtcatgaaaccacttcttatagaa
caactaatggatcaagaagtagtgaatctatccggtggggagttgcaaagagttgctttg
tgcctctgtcttgggaagcctgcagatatttatctgatagatgaaccaagtgcttatctt
gattctgagcagcgtattgtggcttcaaaagtcataaagaggtttatccttcatgcgaag
aaaactgcatttgtggtagagcatgattttataatggcaacttacctggctgacagagtt
atcgtatacgagggaaggccatctgtggactgtacagcaaattcgcctcagtcattgttg
actggaatgaatctcttcttatcacatctagatatcacttttaggcgggacccaacgaat
tatcgaccgagaatcaacaagttagactctaccaaggatagagagcagaagtctgctggg
tcatattattacctggatgattga
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